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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-04 16:02:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:4279600-4279622
GATGGTTAGCAGCAACTCCTACTCTTTCCA4279600CAGCATCAAATCCATCAGCCTGTTCATAGAATTGTGAAGCCACATGTTATGTC
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:4246005-4246027
GATGGTTAGCAGCAACTCCTACTCTTTCCA4246005CAGCATCAAATCCATCAGCCTGTTCATAGAATTGTGAAGCCACATGTTATGTC
Chenopodium album genome assembly, chromosome: 4.
OX419211.1:3261895-3261917
GATGGTTATCAGCAACTCCAACCCTTTCTA3261895CAGCATCAAATCCATCAGCCTGTTCATAGAGTTGTAAAGTAGTAAGCTACATA
Chenopodium album genome assembly, chromosome: 13.
OX419220.1:3410269-3410291
GATGGTTATCAGCAACTCCAACTCTTTCTA3410269CAGCATCAAATCCATCAGCCTGTTCATTGAGTTGTGAAGTTAGTAAGCTACAT
Chenopodium album genome assembly, chromosome: 22.
OX419229.1:3006805-3006827
GGTGGTTATCAGCAACTCCAACTCTTTCTA3006805CAGCATCAAATCCATCAGCCTGTTCATTGAGTTGTGAAGTTAGTAAGCTATAT
Salicornia ramosissima genome assembly, chromosome: 5.
OX596236.1:51804196-51804218
GATGGTTCGCAGCAACCCCAATTCGTTCTA51804196CAGCATCAAATCCATCAGCCTGTACCACCATACAAAAATCCCGCCACACCATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAGGCTGATGGATTTGATGCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAGGCTGATGGATTTGATGCTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.184 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGGCTGATGGATTTGATGCTG&k=0&no_gap=0&offset=0&limit=50
0.301 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCATCAAATCCATCAGCCTGT&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.004 | cgi_end;

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