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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:04:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:6646731-6646751
CCCCCTTAAATATAGAATTTTTCATTCAAT6646731ACATATAGCACCCTTAGGAAACTACACTAGGACAAAAAATGAGCATAGAAC
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:6891646-6891666
CCCCCTTAAATATAGAATTTTTCATTCAAT6891646ACATATAGCACCCTTAGGAAACTACACTAGGACAAAAAATGAGCAAAGAAC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:6319191-6319211
CCCCCTTAAATATAGAATTTTTCATTCAAT6319191ACATATAGCACCCTTAGGAAACTACACTAGGACAAAAAATGAGCATAGAAC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:6808198-6808218
CCCCCTTAAATATAGAATTTTTCATTCAAT6808198ACATATAGCACCCTTAGGAAACTACACTAGGACAAAAAATGAGCATAGAAC
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:6602553-6602573
CCCCCTTAAATATAGAATTTTTCATTCAAT6602553ACATATAGCACCCTTAGGAAACTACACTAGGACAAAAAATGAGCAAAGAAC
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:5358630-5358650
CCCCCTTACATATAGAATTTCTCCTTCAAT5358630ACATATAGCACCCTTAGGAAACTACACTAGGACAAAAAATGAGCAAACTAT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:39938447-39938467
GTTCTTTGCTCATTTTTTGTCCTAGTGTAG39938447TTTCCTAAGGGTGCTATATGTATTGAATGAAAAATTCTATATTTAAGGGGG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:36657386-36657406
GTTCTTTGCTCATTTTTTGTCCTAGTATAG36657386TTTCCTAAGGGTGCTATATGTATTGAATGAAAATTTCTATATTTAAGGGGG
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:40236283-40236303
GTTCTTTGCTCATTTTTTGTCCTAGTGTAG40236283TTTCCTAAGGGTGCTATATGTATTGAATGAAAAATTCTATATTTAAGGGGG
Malus domestica genome assembly, chromosome: 5.
OU696681.1:39527478-39527498
GTTCTTTGCTCATTTTTTGTCCTAGTGTAG39527478TTTCCTAAGGGTGCTATATGTATTGAATGAAAAATTCTATATTTAAGGGGG
Malus domestica genome assembly, chromosome: 5.
OU744546.1:39086032-39086052
GTTCTTTGCTCATTTTTTGTCCTAGTGTAG39086032TTTCCTAAGGGTGCTATATGTATTGAATGAAAAATTCTATATTTAAGGGGG
Malus domestica genome assembly, chromosome: 5.
OU744957.1:39548536-39548556
GTTCTTTGCTCATTTTTTGTCCTAGTGTAG39548536TTTCCTAAGGGTGCTATATGTATTGAATGAAAAATTCTATATTTAAGGGGG
Malus domestica genome assembly, chromosome: 5.
OU744995.1:40387183-40387203
GTTCTTTGCTCATTTTTTGTCCTAGTGTAG40387183TTTCCTAAGGGTGCTATATGTATTGAATGAAAAATTCTATATTTAAGGGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACATATAGCACCCTTAGGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATATAGCACCCTTAGGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.365 | 0.356 | search_plus_done; http://172.18.8.135:50400/match?q=ACATATAGCACCCTTAGGAAA&k=0&no_gap=0&offset=0&limit=50
0.459 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCCTAAGGGTGCTATATGT&k=0&no_gap=0&offset=0&limit=44
0.463 | 0.005 | cgi_end;

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