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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:16:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:3476019-3476038
ACACCTAGTACTTTTATTCAACAAAACAAG3476019ACATGATGACCATCCATCCAAAGTAACTGAATGTGGATTTATGATATATA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:3517202-3517221
ACTCGTAGTACTTTTATTTAACAAAACAAG3517202ACATGATGACCATCCATCCATAGTAACTGAATGGAGATTTATGATATATA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:3554419-3554438
ACACCTAATACTTTTATTTAACAAAACAAG3554419ACATGATGACCATCCATCCATAACTGAATGGGGATTTATGTTATATATAT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 9.
CP124711.1:2488995-2489014
ACTCGTAGTATTATTATTTAACGAAACATG2488995ACATGATGACCATCCATCCATAGTAATTGACTGGAGATTTATGATATATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 9.
CP124711.1:2658920-2658939
ACTCCTAGTATTATTATTTAACGAAACATG2658920ACATGATGACCATCCATCCATAGTAAGTGAATGGAGATTTATGATATATA
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:164434911-164434930
TGGTGGAATTCGTTGTCACACGGATCGATG164434911ACATGATGACCATCCATCCATCCATCTCTCCATACCACATCCATCCATCC
Cepaea hortensis genome assembly, chromosome: 4.
OY992879.1:113388162-113388181
GTGGGATGGTCGAACTGCAAACGGTATGGC113388162ACATGATGACCATCCATCCATCCATCATGTGCCATGCCGGTAAGCGTGGG
Solea senegalensis genome assembly, chromosome: I.
OW185640.1:2373879-2373898
CCCTCATGCGGAGGATAAAGTGGTAGGTAA2373879TGGATGGATGGTCATCATGTGGGACCATACATGATACTGATGTTGTAAAA
Pelobates cultripes genome assembly, chromosome: 04.
OW240915.1:205887498-205887517
ACTCCTACAGTGCAAGCATTCAGCTCTGGA205887498TGGATGGATGGTCATCATGTCAAAAACTAATGAAACCATGGTGCTGATCT
KS20008F01 KS20 Capsicum annuum cDNA, mRNA sequence.
GD094066.1:204-223
TATATATCATAAATCCCCATTCAGTTACTA204TGGATGGATGGTCATCATGTCTTGTTTTGTTAAATAAAAGTACTACGAGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:288788054-288788073
ATATATATAACATAAATCCCCATTCAGTTA288788054TGGATGGATGGTCATCATGTCTTGTTTTGTTAAATAAAAGTAGTAGGTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:288878364-288878383
ATATATATATAAATCCACATTCAGTTACTT288878364TGGATGGATGGTCATCATGTCTTGTTTTGTTGAATAAAAGTACTAGGTGT
Aelia acuminata genome assembly, chromosome: 3.
OU426981.1:119643666-119643685
TCCTTCTTTTTCTCTTCTTCTAAGAGTATT119643666TGGATGGATGGTCATCATGTGAAGTTCAGAGTGCATTAATCCTTAAGGAA
Pandemis heparana genome assembly, chromosome: 1.
OY978007.1:4398569-4398588
ATACGTAGTTCAGACAAAAACACATTTGGC4398569TGGATGGATGGTCATCATGTTATTATTGTGACCAAGATCTTATGTTAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACATGATGACCATCCATCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATGATGACCATCCATCCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.242 | 0.234 | search_plus_done; http://172.18.8.135:50400/match?q=ACATGATGACCATCCATCCA&k=0&no_gap=0&offset=0&limit=50
0.441 | 0.199 | search_minus_done; http://172.18.8.135:50400/match?q=TGGATGGATGGTCATCATGT&k=0&no_gap=0&offset=0&limit=43
0.446 | 0.005 | cgi_end;

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