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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-07 15:22:30, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vigna angularis mRNA, clone: VES06M22.
HX944649.1:5-24
AAAT5ACCAATCACACCCACATCAATATCACTTCATATAATAATAATAATAATGA
Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
AP015038.1:1180783-1180802
GTGTCATGAACATGTACTAGTCAACAAAAT1180783ACCAATCACACCCACATCAATATCACTTCATATAATAATAATAATAATGA
Vigna mungo isolate Urdbean chromosome 10.
CP144691.1:2221174-2221193
GTATGATGCACACGTACTAGTCAACAAAAT2221174ACCAATCACACCCACATCAATATCTCTTCATATAATAATAATAATAATGG
Xanthium orientale genome assembly, chromosome: 1.
OZ186455.1:101333514-101333533
CCCATTTCTCTTCGTTTCTCATTAACCACA101333514ACCAATCACACCCACATCAATTTGTCAGTTCACCACCACAAAAAGCTACC
Xanthium orientale genome assembly, chromosome: 2.
OZ186456.1:14573341-14573360
TCTAGAATTAGTACATGCAGATTTATGTGG14573341ACCAATCACACCCACATCAATAGCAGGCAACAACTATTTCTTCGTGATAG
Taurulus bubalis genome assembly, chromosome: 4.
OU342714.1:191309-191328
CTTCTTTGATTTTTGTAACTTTCCCAAACT191309ACCAATCACACCCACATCAACCAGTGACTTTCACAGGTGAGCTTAGAGGT
Triturus cristatus genome assembly, chromosome: 1_2.
OZ123757.1:559154539-559154558
GAAAAGAAAGGAGAAATAAAAACATTTCTC559154539ACCAATCACACCCACATCAAAAGTGCATTACTTTTTGATGCAAAACCCAG
Vespertilio murinus genome assembly, chromosome: 3.
OZ004706.1:49466740-49466759
CAGAACTAGTCTTAATCACTCAACATCACA49466740TTGATGTGGGTGTGATTGGTGGTTGCTGGCCCTGATCGCCCCTGACAGTT
Sambucus nigra genome assembly, chromosome: 16.
OX422222.1:133800502-133800521
ATGGGTTTGTTGATTTTTTTTAAGGATACT133800502TTGATGTGGGTGTGATTGGTTGTGATAAAGATTGGGGTTTTAATTGTCCT
Tanacetum vulgare genome assembly, chromosome: 8.
OZ183345.1:246443286-246443305
TGTTGGTTGGAGAGTGATGAGGTTCAGTTG246443286TTGATGTGGGTGTGATTGGTGGTGAATTTGAATTTAGTGTTTCATCTGAT
Tanacetum vulgare genome assembly, chromosome: 8.
OZ183345.1:246446422-246446441
TGTTGGTTGAAGAGTTATGAGGTTCAGTTG246446422TTGATGTGGGTGTGATTGGTGGTGAATTTGAATTTGGTGTATCATCTGAT
Planococcus sp. X10-3 chromosome, complete genome.
CP175504.1:2497617-2497636
TTGGCCACTTGTCTCCCGATGCACCGGCTG2497617TTGATGTGGGTGTGATTGGTGGCGATGCATTATTCAGTGGGGCTGAATTC
Oligia strigilis genome assembly, chromosome: 20.
OX637560.1:12549740-12549759
GGTGTCATGATATGTATAGACTTTGTGTTG12549740TTGATGTGGGTGTGATTGGTGTGTTGTGTGCACGGAATAGATAAATTATC
Scyliorhinus canicula genome assembly, chromosome: 3.
LR744032.1:38327351-38327370
GATTGAAACGTCTACTTTTTTTCATTTTCA38327351TTGATGTGGGTGTGATTGGTTAGGCTGGCATTTGCCCATCCCTAATTGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCAATCACACCCACATCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCAATCACACCCACATCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.454 | 0.445 | search_plus_done; http://172.18.8.135:50800/match?q=ACCAATCACACCCACATCAA&k=0&no_gap=0&offset=0&limit=50
0.598 | 0.145 | search_minus_done; http://172.18.8.135:50800/match?q=TTGATGTGGGTGTGATTGGT&k=0&no_gap=0&offset=0&limit=43
0.603 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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