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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:31:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Picea abies EST, clone K0000400048H08F1.
AM174478.1:228-247
ACAATACAGCTTTGCAGGGCAGATGTGTCC228ACCATTGCTTTTGGACTTGCTGCATCAACTGCATCCATAGTCTTAGCAGG
109F08_544403 Douglas-fir cDNA library PmIFG_73-6 Pseudotsuga menziesii var. menziesii cDNA clone Df109-F08 5, mRNA sequence.
CN635075.1:281-300
ACAATACAGCTTTGCAGGGCAGATGTATCC281ACCATTGCTTTTGGACTTGCTGCATCAACTGCATCCATAGTCTTANCAGG
Dianthus caryophyllus mRNA, clone: CES05B20, 5' end sequence.
FY384026.1:4-23
GGG4ACCATTGCTTTTGGACTTGCCAACACTTTTCCTCCTTCTTCTTCTTCTTC
Dianthus caryophyllus mRNA, clone: CFES23E16, 5' end sequence.
FY402545.1:13-32
GAGGAAATGCGG13ACCATTGCTTTTGGACTTGCCAACACTTTTCCTCCTTCTTCTTCTTCTTC
Dianthus caryophyllus mRNA, clone: CFES23K17, 5' end sequence.
FY402689.1:42-61
TAATTGAAGAATAGTGGTGAGGAAATGCGG42ACCATTGCTTTTGGACTTGCCAACACTTTTCCTCCTTCTTCTTCTTCTTC
Apamea monoglypha genome assembly, chromosome: 17.
OU426931.1:17637176-17637195
CTAAGGTTCGATATAGATCTTTCTCGTACA17637176ACCATTGCTTTTGGACTTGCGTTGATCCCTTTTGGACTTGGTCAAAAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCATTGCTTTTGGACTTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCATTGCTTTTGGACTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.503 | 0.494 | search_plus_done; http://172.18.8.135:50400/match?q=ACCATTGCTTTTGGACTTGC&k=0&no_gap=0&offset=0&limit=50
0.590 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAGTCCAAAAGCAATGGT&k=0&no_gap=0&offset=0&limit=44
0.590 | 0.000 | cgi_end;

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