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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 07:46:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pipistrellus pipistrellus genome assembly, chromosome: 13.
LR862369.1:33363166-33363185
GCTGAGCTTCAGCTTCCCTCTTCCCCGGAA33363166ACCCCATCCTTTCAGACACAGCTCACACAGCCTCCAGGATGCAGCTCTGC
Eptesicus nilssonii genome assembly, chromosome: 16.
OX621295.1:39227404-39227423
GCTGAGCTCCAGCTTCTCTCTTCTCCGGAA39227404ACCCCATCCTTTCAGACACAGCCGACACACACCCTCCAGGACGCAGCTCT
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:120565083-120565102
CTGTCTTTTTCCAAGCAATTGAAAATTATC120565083ACCCCATCCTTTCAGACACAATAATTCTTAGTCCAGTGAATAGTTGACGT
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:122298849-122298868
ATGTCTTTTTCCAAGCAATTGAAAATTATC122298849ACCCCATCCTTTCAGACACAATAATTTTTAGTCCAGTGAATAGTTGACGT
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:134797691-134797710
ATGTCTTTTTCCAAGCAATTGAAAATTATC134797691ACCCCATCCTTTCAGACACAATAATTTTTAGTCCAGTGAATAGTTGACGT
Avena eriantha genome assembly, chromosome: 1C.
OU342740.1:28380510-28380529
AGGAGCATTGGAGGGCCATGAGATGGTGCA28380510ACCCCATCCTTTCAGACACATACATGGGCATCAGCAAGAACCAGAGGATG
Plecotus auritus genome assembly, chromosome: 9.
OY734030.1:24958815-24958834
AAAGCTGAATCCTGGAGGGTGTGTGTCAGC24958815TGTGTCTGAAAGGATGGGGTTTCCGGAGAATGGAGAAGCTGGAGCTCAGT
Arachis hypogaea DNA, clone: SATE0829.
DH968345.1:229-248
ATCTTCATTGGAGTAGCCACCAAAAATTAT229TGTGTCTGAAAGGATGGGGTGATAATTTTCAATTGCTTGGAAAAAGACAT
Avena eriantha genome assembly, chromosome: 6C.
OU342745.1:327419850-327419869
GGAGAAGCCTCACCTTGTTGATGCCATGTA327419850TGTGTCTGAAAGGATGGGGTTGCACCATCTCATGGCCCCCCAATGCTCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCCCATCCTTTCAGACACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCCCATCCTTTCAGACACA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.235 | 0.226 | search_plus_done; http://172.18.8.135:50400/match?q=ACCCCATCCTTTCAGACACA&k=0&no_gap=0&offset=0&limit=50
0.362 | 0.127 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGTCTGAAAGGATGGGGT&k=0&no_gap=0&offset=0&limit=44
0.364 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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