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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:40:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdlr7001H09.g1 Apple_EST_Mdlr Malus domestica cDNA similar to ref|NP_189306.1| glycosyl hydrolase family 38 (alpha-mannosidase) [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis th
DT001709.1:223-242
GCCCTCAAAACGCAACTCCGATGCAATTGT223ACGAGAGGCACAAAACCTTCATTTTCACGAACCATACATACGGAGGTGAT
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141918.1:34424645-34424664
GCCCTCAAAACGCAACTCCGATGCAATTGT34424645ACGAGAGGCACAAAACCTTCATTTTCACGAACCATACATACGGAGGTGAT
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:33702441-33702460
GCCCTCAAAACGCAACTCCGATGCAATTGT33702441ACGAGAGGCACAAAACCTTCATTTTCACGAACCATACATACGGAGTTGAT
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:34916631-34916650
GCCCTCAAAACGCAACTCCGATGCAATTGT34916631ACGAGAGGCACAAAACCTTCATTTTCACGAACCATACATACGGAGGTGAT
Mdfw2017m02.y1 Mdfw Malus domestica cDNA clone Mdfw2017m02 5' similar to TR:P94078 P94078 ALPHA-MANNOSIDASE, mRNA sequence.
CN490636.1:447-466
ATCACCTCCGTATGTATGGTTCGTGAAAAT447GAAGGTTTTGTGCCTCTCGTACAATTGCATCGGA
fl_08H04 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD255031.1:264-283
ATCACCTCCGTATGTATGGTTCGTGAAAAT264GAAGGTTTTGTGCCTCTCGT
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143383.1:229998-230017
ATCACCTCCGTATGTATGGTTCGTGAAAAT229998GAAGGTTTTGTGCCTCTCGTACAATTGCATCGGAGTTGCGTTTTGAGGAC
Malus sylvestris genome assembly, chromosome: 9.
OU696511.1:276531-276550
ATCACCTCCGTATGTATGGTTCGTGAAAAT276531GAAGGTTTTGTGCCTCTCGTACAATTGCATCGGAGTTGCGTTTTGAGGGC
Malus domestica genome assembly, chromosome: 9.
OU696685.1:275021-275040
ATCACCTCCGTATGTATGGTTCGTGAAAAT275021GAAGGTTTTGTGCCTCTCGTACAATTGCATCGGAGTTGCGTTTTGAGGGC
Malus domestica genome assembly, chromosome: 9.
OU744961.1:282609-282628
ATCACCTCCGTATGTATGGTTCGTGAAAAT282609GAAGGTTTTGTGCCTCTCGTACAATTGCATCGGAGTTGCGTTTTGAGGGC
Malus domestica genome assembly, chromosome: 9.
OU744999.1:273242-273261
ATCACCTCCGTATGTATGGTTCGTGAAAAT273242GAAGGTTTTGTGCCTCTCGTACAATTGCATCGGAGTTGCGTTTTGAGGGC
Malus x robusta genome assembly, chromosome: 8.
OY720332.1:264191-264210
ATCACCTCCGTATGTATGGTTCGTGAAAAT264191GAAGGTTTTGTGCCTCTCGTACAATTGCATCGGAGTTGCGTTTTGAGGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGAGAGGCACAAAACCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGAGAGGCACAAAACCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.219 | 0.210 | search_plus_done; http://172.18.8.135:50400/match?q=ACGAGAGGCACAAAACCTTC&k=0&no_gap=0&offset=0&limit=50
0.419 | 0.200 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGGTTTTGTGCCTCTCGT&k=0&no_gap=0&offset=0&limit=46
0.424 | 0.006 | cgi_end;

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