GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:10:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Musa acuminata AAA Group Unigene19218_NK1 mRNA sequence.
JV415770.1:1669-1688
CGTAAACCCGATGTAGGTACGGCTTTTGTG1669ACGAGGGCTCAGAGAAACAAGCAAGTAGCAAGCAAAGAAGCCCTTTCCTT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A07.
HG996473.1:34992379-34992398
GGGATACCCGATGTAGGTACGGCTTTTGTG34992379ACGAGGGCTCAGAGAAACAAGCAAGTAGCAAGCAAAGAAGCCCTTTTCTT
Musa schizocarpa genome assembly, chromosome: S07.
LS990920.1:38698491-38698510
GGGATACCCGATGTAGGTACGGCTTTTGTG38698491ACGAGGGCTCAGAGAAACAAGCAAGTAGCAAGCAAAGAAGCCCTTTCCTT
Musa schizocarpa genome assembly, chromosome: S07.
LS990920.1:38701565-38701584
GGGGTACCCGATGTAGGTATGGCTTTTGTG38701565ACGAGGGCTCAGAGAAACAAGCAAGTAGCAAGCAAAGAAGCCCTTTCCTT
Laspeyria flexula genome assembly, chromosome: 21.
LR989970.1:12552616-12552635
AACGACTTAGTCATTCCGAGGGCTGTCTGG12552616ACGAGGGCTCAGAGAAACAAAGGAGTTAATTTTGTTAGCTTTATTTTGTA
Lagria hirta genome assembly, chromosome: 1.
OX375794.1:40433968-40433987
GATAGAGTTATTTCTGTAGATTCTTGGTTT40433968ACGAGGGCTCAGAGAAACAAAAAAAATGTAGAAATACTGAAACGTAAAAC
Meiosimyza decipiens genome assembly, chromosome: 3.
OY804260.1:49213400-49213419
GAAATGAGTTGTATATCATTTAGACGGGCT49213400ACGAGGGCTCAGAGAAACAAAAAGTCTTTTTTCGGCAAATCGAATTTTAG
Antiaris toxicaria isolate JCLG002 chromosome 5.
CP141157.1:33315600-33315619
CTCTTTTACTTCCTTTTTAGCTTCTATTCA33315600TTGTTTCTCTGAGCCCTCGTCCTATAAAGAGGCTGTTTGTGATCCACTTT
Antiaris toxicaria isolate JCLG002 chromosome 5.
CP141170.1:32311440-32311459
CTCTTTTACTTCCTTTTTAGCTTATGTTCA32311440TTGTTTCTCTGAGCCCTCGTCCTATAGAGAGGTTGTTTGTGATCCACTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGAGGGCTCAGAGAAACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGAGGGCTCAGAGAAACAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.185 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=ACGAGGGCTCAGAGAAACAA&k=0&no_gap=0&offset=0&limit=50
0.280 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTTTCTCTGAGCCCTCGT&k=0&no_gap=0&offset=0&limit=43
0.282 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).