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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:11:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:40470279-40470298
GTGGCATCAGGCTCAGAGGAGTCACCCTTG40470279GAAGGCCAACCTGATTCAGTCACTACAACAGGGACATTGGTGAAGTTTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:40656449-40656468
GTGGCATCAGGCTCAGAGGAGTCACCCTTG40656449GAAGGCCAACCTGATTCAGTCACTACAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 1.
OX419208.1:61164293-61164312
GTGGCATCAGGCTCAGATGAGTCACCCTTT61164293GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 10.
OX419217.1:22956479-22956498
GTGGCATCAGGCTCAGATGAGTCACCCTTG22956479GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:17307952-17307971
GTGGCATCAGGCTCAGATGAGTCACCCTTG17307952GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Sambucus nigra genome assembly, chromosome: 3.
OX422209.1:327150666-327150685
CTAGCATCTGGCTCAGACGAGTCACCCCTA327150666GAAGGCCAACCTGATTCAGTCACTGTGATGGGTATATTGGTGAAATTTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTGAATCAGGTTGGCCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGAATCAGGTTGGCCTTC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.202 | 0.194 | search_plus_done; http://172.18.8.135:50400/match?q=ACTGAATCAGGTTGGCCTTC&k=0&no_gap=0&offset=0&limit=50
0.288 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGGCCAACCTGATTCAGT&k=0&no_gap=0&offset=0&limit=50
0.292 | 0.004 | cgi_end;

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