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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 08:37:07, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chenopodium quinoa cultivar CHEN199 chromosome 6B.
CP135320.1:56201341-56201360
CTAAACTTCACCAATGTCCCTGTTATTGTG56201341ACTGAATCAGGTTGGCCTTCAAAGGGTGACTCATCTGAGCCTGATGCCAC
Chenopodium quinoa cultivar CHEN90 chromosome 6B.
CP135356.1:61346390-61346409
CTAAACTTCACCAATGTCCCTGTTATTGTG61346390ACTGAATCAGGTTGGCCTTCAAAGGGTGACTCATCTGAGCCTGATGCCAC
Chenopodium quinoa cultivar D10126 chromosome 6B.
CP135374.1:56299240-56299259
CTAAACTTCACCAATGTCCCTGTTATTGTG56299240ACTGAATCAGGTTGGCCTTCAAAGGGTGACTCATCTGAGCCTGATGCCAC
Chenopodium quinoa genome assembly, chromosome: Cq6B.
OY737728.1:56299240-56299259
CTAAACTTCACCAATGTCCCTGTTATTGTG56299240ACTGAATCAGGTTGGCCTTCAAAGGGTGACTCATCTGAGCCTGATGCCAC
Chenopodium quinoa genome assembly, chromosome: Cq6B.
OY737747.1:56201341-56201360
CTAAACTTCACCAATGTCCCTGTTATTGTG56201341ACTGAATCAGGTTGGCCTTCAAAGGGTGACTCATCTGAGCCTGATGCCAC
Chenopodium quinoa genome assembly, chromosome: Cq6B.
OY737785.1:61346390-61346409
CTAAACTTCACCAATGTCCCTGTTATTGTG61346390ACTGAATCAGGTTGGCCTTCAAAGGGTGACTCATCTGAGCCTGATGCCAC
Melampyrum sylvaticum genome assembly, chromosome: 5.
OZ219243.1:441460844-441460863
CTCAACGTGACGAATGTTCCTGTCTTGGTG441460844ACTGAATCAGGTTGGCCTTCGAAGGGAGGGACTAATGAGCCGGACGCAAA
Spergula arvensis genome assembly, chromosome: 5.
OZ240758.1:24122253-24122272
TTAAACTTCACCAATGTTCCTGTTGTCGTG24122253ACTGAATCAGGTTGGCCTTCCAAAGGTGACTCAGGTGAACCGGATGCCAC
Bradypus torquatus genome assembly, chromosome: 4.
OZ022601.1:118105858-118105877
TGCTTATAAAAGACTCCAATTATCTGGACT118105858GAAGGCCAACCTGATTCAGTTGGCCACACCTTAACTAAAAATAACACCTT
Chenopodium quinoa cultivar PI614919 chromosome 6A.
CP135301.1:47332294-47332313
GTGGCATCAGGCTCAGATGAGTCACCCTTG47332294GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa cultivar CHEN199 chromosome 6A.
CP135319.1:47692569-47692588
GTGGCATCAGGCTCAGATGAGTCACCCTTG47692569GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa cultivar 0321072RM chromosome 6A.
CP135337.1:47836691-47836710
GTGGCATCAGGCTCAGATGAGTCACCCTTG47836691GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa cultivar CHEN90 chromosome 6A.
CP135355.1:46997176-46997195
GTGGCATCAGGCTCAGATGAGTCACCCTTG46997176GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa cultivar D10126 chromosome 6A.
CP135373.1:47261646-47261665
GTGGCATCAGGCTCAGATGAGTCACCCTTG47261646GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa cultivar D12282 chromosome 6A.
CP135391.1:48467202-48467221
GTGGCATCAGGCTCAGATGAGTCACCCTTG48467202GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa cultivar Javi chromosome 6A.
CP135409.1:48184114-48184133
GTGGCATCAGGCTCAGATGAGTCACCCTTG48184114GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa cultivar Regalona chromosome 6A.
CP135427.1:48034269-48034288
GTGGCATCAGGCTCAGATGAGTCACCCTTG48034269GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:40470279-40470298
GTGGCATCAGGCTCAGAGGAGTCACCCTTG40470279GAAGGCCAACCTGATTCAGTCACTACAACAGGGACATTGGTGAAGTTTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:40656449-40656468
GTGGCATCAGGCTCAGAGGAGTCACCCTTG40656449GAAGGCCAACCTGATTCAGTCACTACAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 1.
OX419208.1:61164293-61164312
GTGGCATCAGGCTCAGATGAGTCACCCTTT61164293GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 10.
OX419217.1:22956479-22956498
GTGGCATCAGGCTCAGATGAGTCACCCTTG22956479GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:17307952-17307971
GTGGCATCAGGCTCAGATGAGTCACCCTTG17307952GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Sambucus nigra genome assembly, chromosome: 3.
OX422209.1:327150666-327150685
CTAGCATCTGGCTCAGACGAGTCACCCCTA327150666GAAGGCCAACCTGATTCAGTCACTGTGATGGGTATATTGGTGAAATTTAA
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737708.1:47836691-47836710
GTGGCATCAGGCTCAGATGAGTCACCCTTG47836691GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737727.1:47261646-47261665
GTGGCATCAGGCTCAGATGAGTCACCCTTG47261646GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737746.1:47692569-47692588
GTGGCATCAGGCTCAGATGAGTCACCCTTG47692569GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737765.1:47332294-47332313
GTGGCATCAGGCTCAGATGAGTCACCCTTG47332294GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737784.1:46997176-46997195
GTGGCATCAGGCTCAGATGAGTCACCCTTG46997176GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737803.1:48467202-48467221
GTGGCATCAGGCTCAGATGAGTCACCCTTG48467202GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737822.1:48184114-48184133
GTGGCATCAGGCTCAGATGAGTCACCCTTG48184114GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Chenopodium quinoa genome assembly, chromosome: Cq6A.
OY737841.1:48034269-48034288
GTGGCATCAGGCTCAGATGAGTCACCCTTG48034269GAAGGCCAACCTGATTCAGTCACGATAACCGGAACATTAATGAAGTTTAG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 5.
OZ077128.1:52140874-52140893
GTGGCATCTGGCTCAGAGGAGTCGCCTTTC52140874GAAGGCCAACCTGATTCAGTCACTATTACGGGAATATTAGTGCAATTCAG
Blitum bonus-henricus genome assembly, chromosome: 1.
OZ208742.1:31880124-31880143
GTGGCATCAGGCTCAGTTGAGTCACCCTTG31880124GAAGGCCAACCTGATTCAGTCACGACAACAGGAACATTGGTGAAATTTAG
Blitum bonus-henricus genome assembly, chromosome: 5.
OZ208746.1:39502588-39502607
GTGGCATCAGGCTCAGTTGAGTCACCCTTG39502588GAAGGCCAACCTGATTCAGTCACGACAACAGGAACATTGGTGAAATTTAG
Spinacia oleracea genome assembly, chromosome: 2.
OZ260145.1:56117617-56117636
GTGGCATCAGGCTCAGTTGAGTCACCCTTG56117617GAAGGCCAACCTGATTCAGTCACGATCACAGGAACATTGGTGAAATTTAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTGAATCAGGTTGGCCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGAATCAGGTTGGCCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.161 | 0.152 | search_plus_done; http://172.18.8.135:50900/match?q=ACTGAATCAGGTTGGCCTTC&k=0&no_gap=0&offset=0&limit=50
0.260 | 0.098 | search_minus_done; http://172.18.8.135:50900/match?q=GAAGGCCAACCTGATTCAGT&k=0&no_gap=0&offset=0&limit=42
0.278 | 0.019 | cgi_end;

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