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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:24:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CSATR1JP-T3-026_L08_19DEC2008_022 CSATR1JP Cannabis sativa cDNA, mRNA sequence.
JK497676.1:34-53
TTGGTTTCTTAAAGCTTTTTCATGGAAACA34ACTTCTTCTACTCAGGCCCCACTTCCAACCTCATCTTCATCTTCATCTTC
TSA: Cannabis sativa PK11736.1_1.CasaPuKu mRNA sequence.
JP449800.1:26-45
TTCTTAAAGCTTTTTCATGGAAACA26ACTTCTTCTACTCAGGCCCCACTTCCAACCTCATCTTCATCTTCATCTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp286113_c0_seq1.
LA449122.1:1406-1425
AAGTAACGGAGTGAAGAGGACCTTGGAAGT1406GGGGCCTGAGTAGAAGAAGTTGTTTCCATAAGAATCCAAACCCTAGCAGA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp286113_c0_seq2.
LA449123.1:2745-2764
AAGTAACGGAGTGAAGAGGACCTTGGAAGT2745GGGGCCTGAGTAGAAGAAGTTGTTTCCATAAGAATCCAAACCCTAGCAGA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp286113_c0_seq3.
LA449124.1:1651-1670
AAGTAACGGAGTGAAGAGGACCTTGGAAGT1651GGGGCCTGAGTAGAAGAAGTTGTTTCCATAAGAATCCAAACCCTAGCAGA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp286113_c0_seq4.
LA449125.1:3032-3051
AAGTAACGGAGTGAAGAGGACCTTGGAAGT3032GGGGCCTGAGTAGAAGAAGTTGTTTCCATAAGAATCCAAACCCTAGCAGA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp286113_c0_seq5.
LA449126.1:2121-2140
AAGTAACGGAGTGAAGAGGACCTTGGAAGT2121GGGGCCTGAGTAGAAGAAGTTGTTTCCATAAGAATCCAAACCCTAGCAGA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp286113_c0_seq6.
LA449127.1:3656-3675
AAGTAACGGAGTGAAGAGGACCTTGGAAGT3656GGGGCCTGAGTAGAAGAAGTTGTTTCCATAAGAATCCAAACCCTAGCAGA
Humulus lupulus genome assembly, chromosome: X.
OY720650.1:205877451-205877470
AAGTAACGGAGTGAAGAGGACCTTGGAAGT205877451GGGGCCTGAGTAGAAGAAGTTGTTTCCATAAGAATCCAAACCCTAGCAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTTCTTCTACTCAGGCCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTTCTTCTACTCAGGCCCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.279 | 0.271 | search_plus_done; http://172.18.8.135:50400/match?q=ACTTCTTCTACTCAGGCCCC&k=0&no_gap=0&offset=0&limit=50
0.500 | 0.221 | search_minus_done; http://172.18.8.135:50400/match?q=GGGGCCTGAGTAGAAGAAGT&k=0&no_gap=0&offset=0&limit=48
0.504 | 0.004 | cgi_end;

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