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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:29:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdst6003c12.y1 Mdst Malus domestica cDNA clone Mdst6003c12 5' similar to TR:Q9SZA7 Q9SZA7 HYPOTHETICAL 96.2 KD PROTEIN, mRNA sequence.
CV083028.1:153-174
TTCGCTATCAAATCTTAAGAGAATTAGATT153AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Mdrtp1007L24.g1 Apple_EST_Mdrtp Malus domestica x Malus sieversii cDNA similar to emb|CAD41085.1| OSJNBb0011N17.2 [Oryza sativa (japonica cultivar-group)], mRNA sequence.
DT043229.1:180-201
TTCGCTATCAAATCTTAAGAGAATTAGATT180AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
030130ABPB003016HT (ABPB) M9 root tips Malus domestica cDNA clone ABPB003016, mRNA sequence.
EB152041.1:70-91
TTCGCTATCAAATCTTAAGAGAATTAGATT70AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:24321980-24322001
TTCGCTATCAAATCTTAAGAGAATTAGATT24321980AGAACGTATTTCAATTCCTCCCATAAGCAGGGTCCTTAAACAGTTGAAAAGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:24407371-24407392
TTCGCTATCAAATCTTAAGAGAATTAGATT24407371AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:21564986-21565007
TTCGCTATCAAATCTTAAGAGAATTAGATT21564986AGAACGTATTTCAATTCCTCCCATAAGCAAGGTTCTTAAACAGTTGAAAAGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:21635410-21635431
TTCGCTATCAAATCTTAAGAGAATTAGATT21635410AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:21746929-21746950
TTCGCTATCAAATCTTAAGAGAATTAGATT21746929AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:23984937-23984958
TTCGCTATCAAATCTTAAGAGAATTAGATT23984937AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:24063772-24063793
TTCGCTATCAAATCTTAAGAGAATTAGATT24063772AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTGAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU696691.1:24199828-24199849
TTCGCTATCAAATCTTAAGAGAATTAGATT24199828AGAACGTATTTCAATTCCTCCCATAAGCAGGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU696691.1:24274061-24274082
TTCGCTATCAAATCTTAAGAGAATTAGATT24274061AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU696691.1:24394211-24394232
TTCGCTATCAAATCTTAAGAGAATTAGATT24394211AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU744556.1:24158301-24158322
TTCGCTATCAAATCTTAAGAGAATTAGATT24158301AGAACGTATTTCAATTCCTCCCATAAGCAGGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU744556.1:24243691-24243712
TTCGCTATCAAATCTTAAGAGAATTAGATT24243691AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU744967.1:24125666-24125687
TTCGCTATCAAATCTTAAGAGAATTAGATT24125666AGAACGTATTTCAATTCCTCCCATAAGCAGGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU744967.1:24199899-24199920
TTCGCTATCAAATCTTAAGAGAATTAGATT24199899AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU744967.1:24320051-24320072
TTCGCTATCAAATCTTAAGAGAATTAGATT24320051AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU745005.1:24070607-24070628
TTCGCTATCAAAACTTAAGAGAATTAGATT24070607AGAACGTATTTCAATTCCTCCCATAAGCAGGGTCCTTAAACAGTTGAAAAGC
Malus domestica genome assembly, chromosome: 15.
OU745005.1:24176845-24176866
TTCGCTATCAAATCTTAAGAGAATTAGATT24176845AGAACGTATTTCAATTCCTCCCATAAGCAAGGTCCTTAAACAGTTGAAAAGC
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:29300647-29300668
GCTTTTAAACTGTTTAAGGGCCTTGCTTAT29300647GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:29402956-29402977
GCTTTTCAACTGTTTAAGGACCTTGCTTAT29402956GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:29431899-29431920
GCTTTTCAACTGTTTAAGGACCTTGCTTAT29431899GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:32121615-32121636
GCTTTTCAACTGTTTAAGGACCTTGCTTAT32121615GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:32227855-32227876
GCTTTTCAACTGTTTAAGGACCCTGCTTAT32227855GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGTTTTGATAGCGAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:28719415-28719436
GCTTTTCAACTGTTTAAGGACCTTGCTTAT28719415GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:28732206-28732227
GCTTTTCAACTGTTTAAGGACCTTGCTTAT28732206GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:29484749-29484770
GCTTTTCAACTGTTTAAGGACCTTGCTTAT29484749GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:29585394-29585415
GCTTTTCAACTGTTTAAGGACCTTGCTTAT29585394GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:29598216-29598237
GCTTTTCAACTGTTTAAGGACCTTGCTTAT29598216GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:29026494-29026515
GCTTTTCAACTGTTTAAGGACCTTGCTTAT29026494GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:29040367-29040388
GCTTTTCAACTGTTTAAGGACCTTGCTTAT29040367GGGAGGAATTGAAATACGTTCTAATCTAATTCTCTTAAGATTTGATAGCGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAACGTATTTCAATTCCTCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAACGTATTTCAATTCCTCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.343 | 0.334 | search_plus_done; http://172.18.8.135:50400/match?q=AGAACGTATTTCAATTCCTCCC&k=0&no_gap=0&offset=0&limit=50
0.469 | 0.126 | search_minus_done; http://172.18.8.135:50400/match?q=GGGAGGAATTGAAATACGTTCT&k=0&no_gap=0&offset=0&limit=30
0.478 | 0.008 | cgi_end;

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