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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 23:37:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:19020666-19020685
GATACTCACTTTATATTAACCACTTTATCG19020666AGAAGACTCGATGGCACTGTTCCGGTTAACATATTATTTTGCACATACCT
Malus domestica genome assembly, chromosome: 12.
OU696688.1:19112385-19112404
GATACTCACTTTATATTAACCACTTTATCG19112385AGAAGACTCGATGGCACTGTTCCGGTTAACATATTATTTTGCACATACCT
Malus domestica genome assembly, chromosome: 12.
OU744553.1:19185614-19185633
GATACTCACTTTATATTAACCACTTTATCG19185614AGAAGACTCGATGGCACTGTTCCGGTTAACATATTATTTTGCACATACCT
Malus domestica genome assembly, chromosome: 12.
OU744964.1:18738927-18738946
GATACTCACTTTATATTAACCACTTTATCG18738927AGAAGACTCGATGGCACTGTTCCGGTTAACATATTATTTTGCACATACCT
PvEST-F-871 Bamboo (Phyllostachys vivax cv. aureocaulis) SSH forward cDNA library Phyllostachys vivax cDNA, mRNA sequence.
JZ894075.1:35-54
TAACATGTGATCCATTGCCAGCGTGTCCAA35ACAGTGCCATCGAGTCTTCTTTCTCTTGCCAGTGGAAGGAAATCAGTTAG
TSA: Pyrus x bretschneideri Unigene553_XinShao mRNA sequence.
JR595972.1:234-253
CTGTATGTTCAAAATAATATGTTAACCGGA234ACAGTGCCATCGAGTCTTCTCGATAAACTGGTTAATATGAACTACGCTGG
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:13215807-13215826
AGGTATGTGCAAAATAATATGTTAACCGGA13215807ACAGTGCCATCGAGTCTTCTCGATAAAGTGGTTAATATGAAGTGAGTATC
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:13320341-13320360
AGGTATGTGCAAAATAATATGTTAACCGGA13320341ACAGTGCCATCGAGTCTTCTCGATAAAGTGATTAATATGAAGTGAGTATC
Pyrus communis genome assembly, chromosome: 9.
OY757076.1:9728204-9728223
AGGTATGTGCAAAATAATATGTTAACCGGA9728204ACAGTGCCATCGAGTCTTCTCGATAAACTGGTTAATATGAAGTGAGTATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAAGACTCGATGGCACTGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAGACTCGATGGCACTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.346 | 0.337 | search_plus_done; http://172.18.8.135:50400/match?q=AGAAGACTCGATGGCACTGT&k=0&no_gap=0&offset=0&limit=50
0.542 | 0.196 | search_minus_done; http://172.18.8.135:50400/match?q=ACAGTGCCATCGAGTCTTCT&k=0&no_gap=0&offset=0&limit=46
0.545 | 0.003 | cgi_end;

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