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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:10:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Camellia sinensis mRNA, clone: ML25C04, 5' end sequence, expressed in mature leaves.
FS947390.1:654-673
GTAAATTTATACCATGCACAACACACGTGG654AGATCCAAGCGAGTGTCCTAAATGTATTTTTCTGTAGTATGATTGTTTGT
EST2758 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 08010904-OUYI_CHAG_31_38.M13+_F05, mRNA sequence.
GE652431.1:695-714
GTAAATTTATACCATGCACAACACACGTGG695AGATCCAAGCGAGTGTCCTAAATGTATTTTTCTGTAGTATGATTGTTTAG
TSA: Camellia sinensis tea_c10830 mRNA sequence.
KA290164.1:828-847
GTAAATTTATACCATGCACAACACACGTGG828AGATCCAAGCGAGTGTCCTAAATGTATTTTTCTGTAGTATGATTGTTTAG
TSA: Camellia sinensis Singletons43930.Casi mRNA sequence.
HP756577.1:227-246
CTAAACAATCATACTACAGAAAAATACATT227TAGGACACTCGCTTGGATCTCCACGTGTGTTGTGCATGGTATAAATTTAC
Tolmerus cingulatus genome assembly, chromosome: 3.
OY390710.1:5015350-5015369
CATTTGGAGGACACTCTTCTGGGGCATCTC5015350TAGGACACTCGCTTGGATCTCTAGGGGGAGCCTCTTTCGGAGGAGGTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATCCAAGCGAGTGTCCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATCCAAGCGAGTGTCCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.333 | 0.324 | search_plus_done; http://172.18.8.135:50400/match?q=AGATCCAAGCGAGTGTCCTA&k=0&no_gap=0&offset=0&limit=50
0.421 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=TAGGACACTCGCTTGGATCT&k=0&no_gap=0&offset=0&limit=47
0.423 | 0.002 | cgi_end;

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