GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-24 17:27:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Heterocephalus glaber genome assembly, chromosome: 4.
OX090912.1:48291981-48292000
ACACTCAGAAAATCTGCTGTGCTTTTCCCC48291981AGATGAGCAACCCATGAAGGCACCTGGGCCACACCAAGCAGAGAGGTTTG
Heterocephalus glaber genome assembly, chromosome: 4.
OX090912.1:48376717-48376736
ACACTCAGAAAATCTGCTGTGCTCTTCCCC48376717AGATGAGCAACCCATGAAGGCACCTGGGCCACACCAAGCAGAGAGGTTTG
Vigna angularis mRNA, clone: VES06D07.
HX944420.1:324-343
TGGTACTCAGTATGACAGTGTTATCGAAGA324AGATGAGCAACCCATGAAGGCTAGTTGCGATGACGAAGAAGAAGAAGAAG
Vigna angularis mRNA, clone: VES07M24.
HX945031.1:324-343
TGGTACTCAGTATGACAGTGTTATCGAAGA324AGATGAGCAACCCATGAAGGCTAGTTGCGATGACGAAGAAGAAGAAGAAG
Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
AP015039.1:37592797-37592816
TGGTACTCAGTATGACAGTGTTATCGAAGA37592797AGATGAGCAACCCATGAAGGCTAGTTGCGATGACGAAGAAGAAGAAGAAG
Ipomoea trifida cultivar NCNSP0306 chromosome 1.
CP025644.1:11320309-11320328
CTTTCCCTCCAAAATGAGGGGAAATTTTGC11320309CCTTCATGGGTTGCTCATCTTTCACCCTCAATCCATGCATCAGACCTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATGAGCAACCCATGAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATGAGCAACCCATGAAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.509 | 0.501 | search_plus_done; http://172.18.8.135:50400/match?q=AGATGAGCAACCCATGAAGG&k=0&no_gap=0&offset=0&limit=50
0.614 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCATGGGTTGCTCATCT&k=0&no_gap=0&offset=0&limit=45
0.615 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).