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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 10:38:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Limanda limanda genome assembly, chromosome: 12.
OY755003.1:18466673-18466692
TCTTTTGTGTCTCAGAGGTTTCACAGGTGG18466673AGGAAAGATGGAGGAGACGAAGGTGGAGAAAGACGACGTGATCAACATCT
AGENAE Rainbow trout multi-tissues library (tcce) clone tcba0014.h.23, 3prim end (3 primer).
CU072052.1:472-491
AAAGATGGAGGAGACGAAAGAACGTTTTTC472AGGAAAGATGGAGGAGACGAAAGAACGTTTCTCTGGAAAGATGGAGGAGA
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_2291.
FX700381.1:67-86
TCCGAAAAGAACGGAGGAAAGGACGAAAGA67AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_10813.
FX734806.1:78-97
TCCGAAAAGAACGGAGGAAAGGACGAAAGA78AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC
BOHKI18TR BOHK Brassica oleracea genomic clone BOHKI18, genomic survey sequence.
BH542348.1:328-347
CCTAGAGATCCGGAAAGAACGGAGGAAAGA328AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC
BONBU82TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONBU82, genomic survey sequence.
BZ440697.1:388-407
CCTAGAGATCCGGAAAGAACGGAGGAAAGA388AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC
BOT01-45F10TR BOT01 Brassica oleracea genomic clone BOT01-45F10, genomic survey sequence.
FI704218.1:181-200
CCTAGAGATCCGGAAAGAACGGAGGAAAGA181AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC
Brassica napus genome assembly, chromosome: A10.
HG994364.1:15711552-15711571
TCCGAAAAGAACGGAGGAAAGGACGAAAGA15711552AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAAC
Brassica napus genome assembly, chromosome: C09.
HG994373.1:57016110-57016129
CCTAGAGATCCGGAAAGAACGGAGGAAAGA57016110AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC
Brassica rapa genome, scaffold: A10.
LR031577.1:12628324-12628343
TCCGAAAAGAACGGAGGAAAGGACGAAAGA12628324AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:55164998-55165017
CCTAGAGATCCGGAAAGAACGGAGGAAAGA55164998AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC
Brassica rapa genome assembly, chromosome: A10.
LS974626.2:15384679-15384698
TCCGAAAAGAACGGAGGAAAGGACGAAAGA15384679AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC
Trididemnum clinides genome assembly, chromosome: 2.
OY776285.1:21783957-21783976
TCGTTAGAGAGAGACAGAGTTTGAGATGAA21783957AGGAAAGATGGAGGAGACGACAGGGTGGCGAGGACAGAACGAGAGTCAAA
Trididemnum clinides genome assembly, chromosome: 4.
OY776287.1:33073642-33073661
TGCCAGATCTGCCACAGAGATTGAGGTAAG33073642AGGAAAGATGGAGGAGACGACAGAACGAAAGTCAGATTGAAGGAGAAGAG
Trididemnum clinides genome assembly, chromosome: 5.
OY776288.1:13880959-13880978
ATGACAGTTTCTGTCAGAGTTTGAGGTAAA13880959AGGAAAGATGGAGGAGACGACAGAGTGGCGAGGACAAAACGGGAGTCAAA
Trididemnum clinides genome assembly, chromosome: 6.
OY776289.1:29061903-29061922
TGTCAGATCTGCCACAAAGTTTGAGATAAG29061903AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACGAGAGTCAGA
Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:3193387-3193406
TGCCAGATCTGCCACAGAGTTTGAGTTAAG3193387AGGAAAGATGGAGGAGACGACAGAGCGGCGAGGATAGAACGAGAGTCAGA
Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:9477317-9477336
AAAACAGTTCCTGCCAGAGATTGAGATAAA9477317AGGAAAGATGGAGGAGACGACAGAGTGCCGAGGAAAGAGCGAGAATCAGA
Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:26622294-26622313
TGCCAGATCTGCCACAGAGTTTGAGATAAG26622294AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACCAGAGTCAGA
Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:26648588-26648607
TGCCAGATCTGTCACAGAGTTTGAGATAAG26648588AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACCAGAGTCAGA
Trididemnum clinides genome assembly, chromosome: 10.
OY776293.1:29283732-29283751
TGCCAGATCTGCCAGAGAGTTTGTGGTAAA29283732AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACTAAAGTCAGA
Trididemnum clinides genome assembly, chromosome: 10.
OY776293.1:36815612-36815631
TGCCAGATCTGCCACAGAGTTTGAGATAAG36815612AGGAAAGATGGAGGAGACGACAGAACGAGAGTCAGACAAGAGAAGAGAAA
Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:3484438-3484457
TGCCAGATGTGCCAAAGAGTTTGAGGTAAA3484438AGGAAAGATGGAGGAGACGACACGGGGCGAGGACAGAGCAAGAGTCAAAA
Trididemnum clinides genome assembly, chromosome: 14.
OY776297.1:28288479-28288498
GACAGTTCCTGCCAAAGAGTTTGAGGTAAA28288479AGGAAAGATGGAGGAGACGACAGGGAGGCGAGGACAGAGCGAGAATCAGA
Trididemnum clinides genome assembly, chromosome: 16.
OY776299.1:6831924-6831943
TGCCAGATCTGCCACACAGTTTGAGATAAG6831924AGGAAAGATGGAGGAGACGACAGGATGGCGAGGACAGAACGAGAGTCAGA
Andrena marginata genome assembly, chromosome: 2.
OZ010660.1:51417032-51417051
GCGGAGCAGAAGTGTTTGCAGAGGCGAAGA51417032AGGAAAGATGGAGGAGACGATATCAATTTGTGGCGACGTGAATTTAATTT
Lipophrys pholis genome assembly, chromosome: 19.
OY726551.1:9065117-9065136
TTTCCCGTGGCCTCCCCGTCTGCCTCACCC9065117TCGTCTCCTCCATCTTTCCTCCTCCCGCTTGTATGCTAGCATTGCCTCTG
BR087358 root cDNA library KFRT Brassica rapa subsp. pekinensis cDNA clone KFRT-039H06 5', mRNA sequence.
EX101068.1:259-278
GCTGCTGGGGATGGTTCCCTACCAATGGCT259TCGTCTCCTCCATCTTTCCTTCTTTCGTCCTTTCCTCCGTTCTTTTCGGA
Brassica napus cultivar Xiang5A chromosome 5.
CP123880.1:5049305-5049324
GTTGCTGGGGATGATTCCCTACCAATGGCT5049305TCGTCTCCTCCATCTTTCCTTCTTTCGTCCTTTCCTCCGTTCTTTTCGGA
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:8410591-8410610
GCTGCTGGGGATGATTCCCTGCCAATGGCT8410591TCGTCTCCTCCATCTTTCCTTCTTTCCTCCGTTCTTTCCGGATCTCTAGG
Lasioglossum lativentre genome assembly, chromosome: 2.
OU744356.1:27320212-27320231
GAGTTTGCAGAAATTCTTTCTTCCATTTTT27320212TCGTCTCCTCCATCTTTCCTTTTTTTCTTTTTCTCTGAATCCTTACCGGG
Ceriagrion tenellum genome assembly, chromosome: 4.
OY720635.1:1023202-1023221
ATGAGAGAAGAGAACGTCGTCGTCGTCGTG1023202TCGTCTCCTCCATCTTTCCTCGACTCGGGTGGTCGATCGACCGACCGACC
Trididemnum clinides genome assembly, chromosome: 2.
OY776285.1:53273979-53273998
ACTACTTACGACTTTTTCGGGGTCACCCTG53273979TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTAGCA
Trididemnum clinides genome assembly, chromosome: 3.
OY776286.1:37556426-37556445
TCTGACTCTCATTCTGTCCTTGCCGCCCTG37556426TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 5.
OY776288.1:13893294-13893313
TCTGACTCCCGTTTTGTCCTCGCCACTCTG13893294TCGTCTCCTCCATCTTTCCTTTTACCTCAAACTCTGACAGAAACTGTCAT
Trididemnum clinides genome assembly, chromosome: 6.
OY776289.1:25651870-25651889
TCTGACTCTCGTTCTGTCCTCGCCACCCTG25651870TCGTCTCCTCCATCTTTCCTTTTGTCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 6.
OY776289.1:28971396-28971415
TCAGACTCTCACTCTGTCCTCGCCACCCTG28971396TCGTCTCCTCCATCTTTCCTTTTACCTCAATCTGTCTCTGGCAGATCTGG
Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:26636379-26636398
TCTGACTCTGGTTCTGTCCTCACCACCCTG26636379TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 9.
OY776292.1:12963885-12963904
TCTGACTCTCGTTGTGTCCACGCCATCCTG12963885TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 10.
OY776293.1:7295638-7295657
TCTGACTCTCGTTCTGTCCTCGCCACCCTG7295638TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGTA
Trididemnum clinides genome assembly, chromosome: 12.
OY776295.1:11936820-11936839
TCTGACTCTCGTTCTGTCCTCGCCACCCTG11936820TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 12.
OY776295.1:12016025-12016044
TCTGGCTCTCGTTCTGTCCTCGCCACCCTG12016025TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 12.
OY776295.1:26662705-26662724
TTTGACTCTCGTTCTGTCCTCGCCACCCTG26662705TCGTCTCCTCCATCTTTCCTTTTACGTCAATCTCCCTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:6716605-6716624
CTCTCCTCCTACTATCTGACTCTCGTTCTG6716605TCGTCTCCTCCATCTTTCCTTTTATCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:6723299-6723318
CTCTCCTCCTACTATCTGACTCTCGTTCTG6723299TCGTCTCCTCCATCTTTCCTTTTATCTCAAACTCTGTGGCCGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:6747651-6747670
CTCTTCTCCTACTATCTGACTCTCGTTCTG6747651TCGTCTCCTCCATCTTTCCTTTTATCTCAAACTCTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 16.
OY776299.1:12003478-12003497
TCTGACTCTCGTTCTGTCCTCGCCACCCTG12003478TCGTCTCCTCCATCTTTCCTCTTATCCAAAAATTTGTGGCAGATCTGGCA
Trididemnum clinides genome assembly, chromosome: 19.
OY776302.1:6800387-6800406
CTCTTCTCCTATCTGATTCTCGCTACTCCT6800387TCGTCTCCTCCATCTTTCCTTTGCCTTAATGTATGGCAGGAACTGTCTTC
Trididemnum clinides genome assembly, chromosome: 19.
OY776302.1:21738973-21738992
TCTGACTCTCGTTCTGTCCTCGCCACCCTG21738973TCGTCTCCTCCATCTTTCCTGTTATCTCAAACTCTGTGGCAGATCTGGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGAAAGATGGAGGAGACGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGAAAGATGGAGGAGACGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.467 | 0.458 | search_plus_done; http://172.18.8.135:50400/match?q=AGGAAAGATGGAGGAGACGA&k=0&no_gap=0&offset=0&limit=50
0.658 | 0.192 | search_minus_done; http://172.18.8.135:50400/match?q=TCGTCTCCTCCATCTTTCCT&k=0&no_gap=0&offset=0&limit=24
0.674 | 0.015 | cgi_end;

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