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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:47:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Dianthus caryophyllus mRNA, clone: CES05N15, 5' end sequence.
FY384308.1:161-180
TCTAATGAATATCCTGTCGTGGATTACTCA161AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA
Dianthus caryophyllus mRNA, clone: CES06D06, 5' end sequence.
FY384440.1:251-270
TCTAATGAATATCCTGTCGTGGATTACTCA251AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA
Dianthus caryophyllus mRNA, clone: CES14A20, 5' end sequence.
FY387413.1:188-207
TCTAATGAATATCCTGTCGTGGATTACTCA188AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA
Dianthus caryophyllus mRNA, clone: CFES18_M05, 5' end sequence.
FY400877.1:272-291
TCTAATGAATATCCTGTCGTGGATTACTCA272AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGCGTACTCAGGAAAGGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGCGTACTCAGGAAAGGGT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.463 | 0.454 | search_plus_done; http://172.18.8.135:50400/match?q=AGGCGTACTCAGGAAAGGGT&k=0&no_gap=0&offset=0&limit=50
0.549 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCTTTCCTGAGTACGCCT&k=0&no_gap=0&offset=0&limit=46
0.549 | 0.000 | cgi_end;

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