GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:44:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:248047715-248047734
GGATCAACAGTATCGTTTGAATGCTAGTCG248047715AGGTTCTGAGGCAACTCCAACATGGGTAGACCAGCTATACATGGAGCAGG
Capsicum annuum Cys-3-His zinc finger protein (KR1) mRNA, partial cds.
DQ862464.1:1998-2017
GGATCAACAGTATCGTTTGAATGCTAGTCG1998AGGTTCTGAGGCAACTCCAACATGGGTAGACCAGCTATACATGGAGCAGG
KS16034A12 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072597.1:393-412
CCTGCTCCATGTATAGCTGGTCTACCCATG393TTGGAGTTGCCTCAGAACCTCGACTAGCATTCAAACGATACTGTTGATCC
KS17027F12 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078047.1:399-418
CCTGCTCCATGTATAGCTGGTCTACCCATG399TTGGAGTTGCCTCAGAACCTCGACTAGCATTCAAACGATACTGTTGATCC
KS20002G12 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093533.1:394-413
CCTGCTCCATGTATAGCTGGTCTACCCATG394TTGGAGTTGCCTCAGAACCTCGACTAGCATTCAAACGATACTGTTGATCC
KS24033F02 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120967.1:417-436
CCTGCTCCATGTATAGCTGGTCTACCCATG417TTGGAGTTGCCTCAGAACCTCGACTAGCATTCAAACGATACTGTTGATCC
TSA: Moniezia expansa Unigene38972_136 mRNA sequence.
JL294357.1:184-203
TTGTTCTTCTGAAAACAATCATGAGCCTAT184TTGGAGTTGCCTCAGAACCTATCAGTCTGCTTCAGCCCCA
TSA: Capsicum annuum MGMT_Contig38077 mRNA sequence.
JW088321.1:405-424
CCTGCTCCATGTATAGCTGGTCTACCCATG405TTGGAGTTGCCTCAGAACCTCGACTAGCATTCAAACGATACTGTTGATCC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:5501155-5501174
CCTGCTCCATGTATAGCTGGTCTACCCATG5501155TTGGAGTTGCCTCAGAACCTCGACTAGCATTCAAACGATACTGTTGATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGTTCTGAGGCAACTCCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTTCTGAGGCAACTCCAA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.178 | 0.169 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTTCTGAGGCAACTCCAA&k=0&no_gap=0&offset=0&limit=50
0.642 | 0.464 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGAGTTGCCTCAGAACCT&k=0&no_gap=0&offset=0&limit=48
0.647 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).