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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 20:01:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Onychomys torridus genome assembly, chromosome: 8.
LR877195.1:13920412-13920432
TCACAGAAGCATTTGGCTGGCTCTCTCCCA13920412AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys arenicola genome assembly, chromosome: 8.
OX460354.1:8856055-8856075
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8856055AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys leucogaster genome assembly, chromosome: 8.
OX460378.1:8617650-8617670
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8617650AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys leucogaster genome assembly, chromosome: 8.
OX460425.1:8613607-8613627
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8613607AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys arenicola genome assembly, chromosome: 8.
OX460449.1:8684576-8684596
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8684576AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys torridus genome assembly, chromosome: 8.
OX460889.1:13920412-13920432
TCACAGAAGCATTTGGCTGGCTCTCTCCCA13920412AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:16120680-16120700
TCTGCTCGGTTCTGTATAAGGTGATTTCAA16120680AGGTTTTAGTAGCAAGGCTTCAACCGTTCCTCTCTCAGATTGTTTCTGTTA
Brassica napus genome assembly, chromosome: A04.
HG994358.1:10640256-10640276
TCTGCTCGGTTCTGTATAAGGTGATTTCAA10640256AGGTTTTAGTAGCAAGGCTTCAACCGTTCCTCTCTCAGATTGTTTCTGTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGTTTTAGTAGCAAGGCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTTTTAGTAGCAAGGCTTC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.265 | 0.257 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTTTTAGTAGCAAGGCTTC&k=0&no_gap=0&offset=0&limit=50
0.366 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGCCTTGCTACTAAAACCT&k=0&no_gap=0&offset=0&limit=42
0.366 | 0.000 | cgi_end;

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