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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:48:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB021E01, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces.
AC232461.1:26990-27011
AAGTTCAAATTGGTATATCATAGCATTCTC26990AGTCGGAGGAAACGCGAAATTAAACTCTATATATATATATATATATATATAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB036H01, complete sequence.
AC189319.1:99799-99820
AAGTTCAAATTGGTATATCATAGCATTCTC99799AGTCGGAGGAAACGCGAAATTAAACTCTATATATATATATATATATATATAT
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:61756571-61756592
AAGTTCAAATTGGTATATCATAGCATTCTC61756571AGTCGGAGGAAACGCGAAATTAAACTCTATATATATATATATATATATATAT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:45577641-45577662
AAGTTCAAATTGGTATATCATAGCATTCTC45577641AGTCGGAGGAAACGCGAAATTAAACTCTATCTATCTATATATATATATTGTT
Brassica rapa genome, scaffold: A09.
LR031568.1:49896238-49896259
AAGTTCAAATTGGTATATCATGGCATTTTC49896238AGTCGGAGGAAACGCGAAATTAAACTCTATATATATATATCTTGTTGTCAAC
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:60368257-60368278
AAGTTCAAATTGGTATATCATGGCATTTTC60368257AGTCGGAGGAAACGCGAAATTAAACTCTATATATATATATCTTGTTGTCAAC
KBrH085D17R KBrH (HindIII) BAC library Brassica rapa subsp. pekinensis Brassica rapa subsp. pekinensis genomic clone KBrH085D17, genomic survey sequence.
DU990113.1:126-147
ACAACAAGATATATATATATATATAGAGTT126TAATTTCGCGTTTCCTCCGACTGAAAATGCCATGATATACCAATTTGAACTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTCGGAGGAAACGCGAAATTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTCGGAGGAAACGCGAAATTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.231 | 0.222 | search_plus_done; http://172.18.8.135:50400/match?q=AGTCGGAGGAAACGCGAAATTA&k=0&no_gap=0&offset=0&limit=50
0.354 | 0.123 | search_minus_done; http://172.18.8.135:50400/match?q=TAATTTCGCGTTTCCTCCGACT&k=0&no_gap=0&offset=0&limit=44
0.354 | 0.001 | cgi_end;

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