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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:40:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Echiichthys vipera genome assembly, chromosome: 6.
OY829651.1:14585857-14585875
GTGGGTGTAAAGAAAAACAAAAACAAAATC14585857AGTCTCCCATTTATGGTCTATGGAGCAGGTTCAGCCTTTTGACTTGGTG
GQ0032.TB_K11 GQ003: Vegetative buds developmental sequence Picea glauca cDNA clone GQ0032_K11 3', mRNA sequence.
CK439448.2:373-391
CCAATAGCTGAGACGAATCCGAGCATGGCG373AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
GQ0011.TB_I09 GQ001: Male strobili developmental sequence Picea glauca cDNA clone GQ0011_I09 3', mRNA sequence.
CK442037.2:392-410
CAAATAGCTGAGACGAATCCGAGCATTGCC392AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAATGCAAAAACGT
GQ0013.TB.1_H14 GQ001: Male strobili developmental sequence Picea glauca cDNA clone GQ0013_H14 3', mRNA sequence.
CK442573.2:390-408
CCAATAGCCGAGACGAATCCGAGCATGGCC390AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAATGCAAAAACGT
GQ0015.TB.1_D13 GQ001: Male strobili developmental sequence Picea glauca cDNA clone GQ0015_D13 3', mRNA sequence.
CK443675.2:359-377
CAAATAGCTGAGACGAATCCGAGCATTGCC359AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAATGCAAAAACGT
WS0064.B21_F19 IS-B-A-7 Picea engelmannii x Picea glauca cDNA clone WS0064_F19 3', mRNA sequence.
CO205543.1:400-418
CCAACAGCTGAGACGAATCCGAGCATGGCG400AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
WS0011.B21_P05 WS-ES-A-1 Picea glauca cDNA clone WS0011_P05 3', mRNA sequence.
CO227384.1:439-457
CCAATAGCTGAGACGAATCCGAGCATGGCC439AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCACCGAAGGCAAACAGGT
WS0011.B21_K19 WS-ES-A-1 Picea glauca cDNA clone WS0011_K19 3', mRNA sequence.
CO227502.1:380-398
CAAATAGCTGAGACGAATCCGAGCATTGCC380AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAATGCAAAAACGT
WS0012.B21_C16 WS-ES-A-1 Picea glauca cDNA clone WS0012_C16 3', mRNA sequence.
CO227602.1:184-202
CCAACAGCTGAGACGAATCCGAGCATGGCG184AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
WS0014.B21_H17 WS-ES-A-1 Picea glauca cDNA clone WS0014_H17 3', mRNA sequence.
CO228338.1:423-441
CAAATAGCTGAGACGAATCCGAGCATTGCC423AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAATGCAAAAACGT
WS0015.B21_K18 WS-ES-A-1 Picea glauca cDNA clone WS0015_K18 3', mRNA sequence.
CO228749.1:427-445
CCAATAGCCGAGACGAATCCGAGCATGGCC427AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAATGCAAAAACGT
WS0016.B21_M14 WS-ES-A-1 Picea glauca cDNA clone WS0016_M14 3', mRNA sequence.
CO229099.1:424-442
CCAATAGCCGAGACGAATCCGAGCATGGCC424AGTCTCCCATTTATGGTCTCTGGCGCTGGCCC
WS0018.B21_C23 WS-ES-A-1 Picea glauca cDNA clone WS0018_C23 3', mRNA sequence.
CO229518.1:423-441
CCAATAGCCGAGACGAATCCGAGCATGGCC423AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAATGCAAAAACGT
WS00110.B21_A06 WS-ES-A-1 Picea glauca cDNA clone WS00110_A06 3', mRNA sequence.
CO229797.1:431-449
CAAATAGCTGAGACGAATCCGAGCATTGCC431AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAATGCAAAAACGT
GQ0174.TB_G06 GQ017: Immature somatic EMBRYOS Picea glauca cDNA clone GQ0174_G06 3', mRNA sequence.
CO478795.2:553-571
CCAACAGCTGAGACGAATCCGAGCATGGCC553AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
GQ0161.TB_J11 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0161_J11 3', mRNA sequence.
CO480766.2:602-620
CCAACAGCTGAGACGAATCCGAGCATGGCC602AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
GQ0166.B7_E02 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0166_E02 3', mRNA sequence.
CO480964.2:614-632
CCAACAGCTGAGACGAATCCGAGCATGGCC614AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
GQ0252.B7_K17 GQ025: Annual flush SHOOTS diurnal cycle- trees Picea glauca cDNA clone GQ0252_K17 3', mRNA sequence.
CO487875.2:629-647
CCAACAGCTGAGACGAATCCGAGCATGGCC629AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
GQ0254.B7_I19 GQ025: Annual flush SHOOTS diurnal cycle- trees Picea glauca cDNA clone GQ0254_I19 3', mRNA sequence.
CO487987.2:385-403
CCAACAGCTGAGACGAATCCGAGCATGGCC385AGTCTCCCATTTATGGTCTCTGGCGCCGGCCCGCTGAAGGCAAAAACGT
WS00944.B21_J08 IS-B-N-A-10 Picea engelmannii x Picea glauca cDNA clone WS00944_J08 3, mRNA sequence.
DR468308.1:635-653
CCAACAGCTGAGACAAATCCGAGCATGGCC635AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
WS02812.CR_I08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02812_I08 3, mRNA sequence.
DR478197.1:397-415
CCAACAGCTGAGACGAATCCGAGCATGGCG397AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
WS02916.CR_K04 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02916_K04 3, mRNA sequence.
DR491120.1:554-572
CCAACAGCTGAGACGAATCCGAGCATGGCC554AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
WS02719.BR_F12 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02719_F12 3, mRNA sequence.
DR507148.1:603-621
CCAACAGCTGAGACAAATCCGAGCATGGCC603AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
WS02742.CR_G06 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02742_G06 3, mRNA sequence.
DR516070.1:421-439
CCAACAGCTGAGACGAATCCGAGCATGGCC421AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
WS02750.CR_C12 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02750_C12 3, mRNA sequence.
DR518764.1:398-416
CCAACAGCTGAGACGAATCCGAGCATGGCG398AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
WS03222.C21_B05 WS-MC-N-A-20 Picea glauca cDNA clone WS03222_B05 3, mRNA sequence.
DR552030.1:464-482
CCAACAGCTGAGACGAATCCGAGCATGGCC464AGTCTCCCATTTATGGTCTCTGGCGCTGGTCCACCGAAGGCAAACAGGT
WS03228.C21_K01 WS-MC-N-A-20 Picea glauca cDNA clone WS03228_K01 3, mRNA sequence.
DR554325.1:424-442
CCAACAGCTGAGACGAATCCGAGCATGGCC424AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAGGCAAAAACGT
WS00728.B21_I19 WS-PS-N-A-8 Picea glauca cDNA clone WS00728_I19 3, mRNA sequence.
DR571244.1:697-715
CCAACAGCTGAGACGAATCCGAGCATGGCC697AGTCTCCCATTTATGGTCTCTGGCGCCGGCCCGCTGAAGGCAAAAACGT
WS00732.B21_O06 WS-PS-N-A-8 Picea glauca cDNA clone WS00732_O06 3, mRNA sequence.
DR572746.1:401-419
CCAACAGCTGAGACGAATCCGAGCATGGCG401AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAACGT
WS00745.C21_P02 WS-PS-N-A-8 Picea glauca cDNA clone WS00745_P02 3, mRNA sequence.
DR577318.1:395-413
CCAACAGCCGAGACGAATCCGAGCATGGCG395AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAACGT
WS0332.C21_G11 WS-SE-N-A-18 Picea glauca cDNA clone WS0332_G11 3, mRNA sequence.
DR583022.1:384-402
CCAACAGCCGAGACGAATCCGAGCATGGCG384AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAGAGCAAAAACGT
GQ0252.B7_D14 GQ025: Annual flush SHOOTS diurnal cycle- trees Picea glauca cDNA clone GQ0252_D14 3', mRNA sequence.
DV990781.2:460-478
CCAACAGCTGAGACGAATCCGAGCATGGCG460AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAACGT
WS0403.C21_B18 SS-S-25 Picea sitchensis cDNA clone WS0403_B18 3', mRNA sequence.
ES262652.1:389-407
CCAACAGCTGAGACGAATCCGAGCATGGCG389AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
WS0428.C21_P20 SS-NE-27 Picea sitchensis cDNA clone WS0428_P20 3', mRNA sequence.
ES671555.1:410-428
CCAACAGCTGAGACGAACCCGAGCATGGCC410AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCACCGAAGGCAAACAAGT
GQ03113.SP6_H09 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03113_H09 3', mRNA sequence.
EX354045.1:587-605
CCAACAGCTGAGACGAATCCGAGCATGGCC587AGTCTCCCATTTATGGTCTCTGGCGCCGGCCCGCTGAAGGCAAAAACGT
WS04222.C21_B09 SS-NE-27 Picea sitchensis cDNA clone WS04222_B09 3', mRNA sequence.
FD743000.1:433-451
CCAACAGCTGAGACGAACCCGAGCATGGCC433AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCACCGAAGGCAAACAAGT
WS0431.C21_G12 SS-NE-28 Picea sitchensis cDNA clone WS0431_G12 3', mRNA sequence.
FD747080.1:416-434
CCAATAGCCGAGACGAATCCGAGCATGGCC416AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAAGGCAAACAAGT
WS0431.C21_N24 SS-NE-28 Picea sitchensis cDNA clone WS0431_N24 3', mRNA sequence.
FD747237.1:384-402
CCAACAGCTGAGACGAATCCGAGCATGGCG384AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
WS0434.C21_G11 SS-NE-28 Picea sitchensis cDNA clone WS0434_G11 3', mRNA sequence.
FD747966.1:397-415
CCAACAGCTGAGACGAATCCGAGCATGGCG397AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
GQ03511.SP6.r_A10 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03511_A10 3', mRNA sequence.
GO365186.1:414-432
CCAATAGCCGAGACGAATCCGAGCATGGCC414AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCCGAATGCAAAAACGT
GQ03606.SP6.r_A02 GQ036 - Shoot tip - Active growth Picea glauca cDNA clone GQ03606_A02 3', mRNA sequence.
GR222964.1:491-509
CCAACAGCTGAGACAAATCCCAACATGGCC491AGTCTCCCATTTATGGTCTCTGGGGCTGGGCCACCGAAAGCAAACAGGT
GQ03906.SP6.r_C09 GQ039 - Stem - Dormant Picea glauca cDNA clone GQ03906_C09 3', mRNA sequence.
GR223190.1:626-644
CCAACAGCTGAGACGAATCCGAGCATGGCC626AGTCTCCCATTTATGGTCTCTGGCGCCGGCCCGCTGGAGGCAAAAACGT
GQ03914.B7P2_H04 GQ039 - Stem - Dormant Picea glauca cDNA clone GQ03914_H04 5', mRNA sequence.
GT052551.1:482-500
CCAACAGCTGAGACGAATCCGAGCATGGCC482AGTCTCCCATTTATGGTCTCTGGCGCCGGCCCGCTGAAGGCAAAAACGT
WS0492.CR_K01 WS-CBM-34 Picea glauca cDNA clone WS0492_K01 3', mRNA sequence.
GW732926.1:479-497
CCAACAGCTGAGACGAATCCGAGCATGGCG479AGTCTCCCATTTATGGTCTCTGGCGCTGGCCCGCTGAAAGCAAAAATGT
Pinus sylvestris EST, clone WZ0APSCA6YC07NM1.
HE625887.1:420-438
CCCAGAGCTGAGACGAATCCGAGCATTGCT420AGTCTCCCATTTATGGTCTCTGGTGCAGGCCCACCGAAAGCAAAAACGT
Pinus sylvestris EST, clone WZ0APSBA1YJ21NM1.
HE628277.1:387-405
CCCACGGCCGAGACGAATCCGAGCATGGCG387AGTCTCCCATTTATGGTCTCCGGCGCTGGTCCCGCGAAAGCAAACACGT
Pinus sylvestris EST, clone WZ0APSBA1YK23NM1.
HE628309.1:392-410
CCCACGGCCGAGACGAATCCGAGCATGGCG392AGTCTCCCATTTATGGTCTCCGGCGCTGGTCCCGCGAAAGCAAACACGT
Pinus sylvestris EST, clone WZ0APSBA1YN22NM1.
HE628395.1:448-466
CCCACGGCCGAGACGAATCCGAGCATGGCG448AGTCTCCCATTTATGGTCTCCGGCGCTGGTCCCCCGAAAGCAAACACGT
Pinus sylvestris EST, clone WZ0APSBA2YP19NM1.
HE628962.1:372-390
CCCACGGCCGAGACGAATCCGAGCATGGCG372AGTCTCCCATTTATGGTCTCCGGCGCTGGTCCCGCGAAAGCAAACACGT
Pinus sylvestris EST, clone WZ0APSBA3YB01NM1.
HE629011.1:459-477
CCCACGGCCGAGACGAATCCGAGCATGGCG459AGTCTCCCATTTATGGTCTCCGGCGCTGGTCCCGCGAAAGCAAACACGT
Pinus sylvestris EST, clone WZ0APSBA3YH19NM1.
HE629223.1:381-399
CCCACGGCCGAGACGAATCCGAGCATGGCG381AGTCTCCCATTTATGGTCTCCGGCGCTGGTCCCGCGAAAGCAAACACGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTCTCCCATTTATGGTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTCTCCCATTTATGGTCT | format : html | download : | debug :

0.008 | 0.008 | search_start;
2.777 | 2.768 | search_plus_done; http://172.18.8.135:50400/match?q=AGTCTCCCATTTATGGTCT&k=0&no_gap=0&offset=0&limit=50
2.918 | 0.141 | search_minus_done; http://172.18.8.135:50400/match?q=AGACCATAAATGGGAGACT&k=0&no_gap=0&offset=0&limit=0
2.918 | 0.000 | cgi_end;

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