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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:13:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 17960 from patent US 7750207.
GX323885.1:392-411
GACGAACCGGCCAAGGAAGAGGGAGAGACC392AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
EL2754F Brassica embryo library (EL) Brassica napus cDNA clone EL2754 3', mRNA sequence.
CN828212.1:332-351
GACGAACCGGCCAAGGAAGAGGGAGAGACC332AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
EX2PLCL3_UP_045_E04_02NOV2004_024 Brassica napus EX2PLCL3 Brassica napus cDNA 5', mRNA sequence.
EE504346.1:292-311
GACGAACCGACCAAGGAAGAGGGAGAGACC292AGTGCTGAGGCTTATAACGAC
OL1321F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL1321, mRNA sequence.
EH414395.1:326-345
GACGAACCGGCCAAGGAAGAGGGAGAGACC326AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL2423F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL2423, mRNA sequence.
EH416596.1:302-321
GACGAACCGGCCAAGGAAGAGGGAGAGACC302AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL283F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL283, mRNA sequence.
EH417441.1:316-335
GACGAACCGGCCAAGGAAGAGGGAGAGACC316AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL3385F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL3385, mRNA sequence.
EH418537.1:310-329
GACGAACCGGCCAAGGAAGAGGGAGAGACC310AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL347F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL347, mRNA sequence.
EH418714.1:324-343
GACGAACCGGCCAAGGAAGAGGGAGAGACC324AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL5077F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5077, mRNA sequence.
EH421650.1:388-407
GACGAACCGGCCAAGGAAGAGGGAGAGACC388AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL5280F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5280, mRNA sequence.
EH422006.1:315-334
GACGAACCGGCCAAGGAAGAGGGAGAGACC315AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL6698F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL6698, mRNA sequence.
EH424785.1:343-362
GACGAACCGGCCAAGGAAGAGGGAGAGACC343AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL6962F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL6962, mRNA sequence.
EH425295.1:271-290
GACGAACCGGCCAAGGAAGAGGGAGAGACC271AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL7510F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL7510, mRNA sequence.
EH426216.1:543-562
GACGAACCGGCCAAGGAAGAGGGAGAGACC543AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL7571F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL7571, mRNA sequence.
EH426336.1:317-336
GACGAACCGGCCAAGGAAGAGGGAGAGACC317AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL7623F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL7623, mRNA sequence.
EH426424.1:327-346
GACGAACCGGCCAAGGAAGAGGGAGAGACC327AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL7631F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL7631, mRNA sequence.
EH426434.1:327-346
GACGAACCGGCCAAGGAAGAGGGAGAGACC327AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL8644F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8644, mRNA sequence.
EH428476.1:293-312
GACGAACCGGCCAAGGAAGAGGGAGAGACC293AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL8847F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8847, mRNA sequence.
EH428878.1:304-323
GACGAACCGGCCAAGGAAGAGGGAGAGACC304AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL8849F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8849, mRNA sequence.
EH428882.1:326-345
GACGAACCGGCCAAGGAAGAGGGAGAGACC326AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL8876F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8876, mRNA sequence.
EH428925.1:273-292
GACGAACCGGCCAAGGAAGAGGGAGAGACC273AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
OL9632F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL9632, mRNA sequence.
EH430426.1:354-373
GACGAACCGGCCAAGGAAGAGGGAGAGACC354AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0198514 Brassica napus Stem library Brassica napus cDNA, mRNA sequence.
EV129006.1:313-332
GACGAACCGGCCAAGGAAGAGGGAGAGACC313AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0203413 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV137487.1:344-363
GACGAACCGGCCAAGGAAGAGGGAGAGACC344AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0203903 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV137977.1:345-364
GACGAACCGGCCAAGGAAGAGGGAGAGACC345AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0152135 Brassica napus Etiolated seedlings (Uni-ZAP) Brassica napus cDNA, mRNA sequence.
EV171443.1:483-502
GACGAACCGGCCAAGGAAGAGGGAGAGACC483AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0152544 Brassica napus Etiolated seedlings (pSPORT1) Brassica napus cDNA, mRNA sequence.
EV180755.1:321-340
GACGAACCGACCAAGGAAGAGGGAGAGACC321AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0101688 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV200535.1:397-416
GACGAACCGGCCAAGGAAGAGGGAGAGACC397AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0102298 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV201145.1:377-396
GACGAACCGGCCAAGGAAGAGGGAGAGACC377AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0171289 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV204108.1:507-526
GACGAACCGACCAAGGAAGAGGGAGAGACC507AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0179909 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV209566.1:522-541
GACGAACCGACCAAGGAAGAGGGAGAGACC522AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0185236 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV213415.1:456-475
GACGAACCGGCCAAGGAAGAGGGAGAGACC456AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0188488 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV215573.1:452-471
GACGAACCGGCCAAGGAAGAGGGAGAGACC452AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
0188846 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV215735.1:449-468
GACGAACCGGCCAAGGAAGAGGGAGAGACC449AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
RR3BC05JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EV546934.1:425-444
GACGAACCGGCCAAGGAAGAGGGAGAGACC425AGTGCTGAGGCTTATAACGACGGATGGACTGAGCTCGGCTCTCACCAAAG
RR3BC16JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EV546943.1:425-444
GACGAACCGGCCAAGGAAGAGGGAGAGACC425AGTGCTGAGGCTTATAACGACGGATGGACTGAGCTCGGCTCTCACCAAAG
BR067145 silique cDNA library KBSP Brassica rapa subsp. pekinensis cDNA clone KBSP-077B03 5', mRNA sequence.
EX082501.1:361-380
GACGAACCGACCAAGGAAGAGGGAGAGACC361AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
RR2BQ23JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EX758831.1:440-459
GACGAACCGGCCAAGGAAGAGGGAGAGACC440AGTGCTGAGGCTTATAACGACGGATGGACTGAGCTCGGCTCTCACCAAAG
RR2BU44JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EX759112.1:398-417
GACGAACCGGCCAAGGAAGAGGGAGAGACC398AGTGCTGAGGCTTATAACGACGGATGGACTGAGCTCGGCTCTCACCAAAG
RR2CF87JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EX760473.1:444-463
GACGAACCGGCCAAGGAAGAGGGAGAGACC444AGTGCTGAGGCTTATAACGACGGATGGACTGAGCTCGGCTCTCACCAAAG
RS3DU62JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence.
EY944463.1:439-458
GACGAACCGGCCAAGGAAGAGGGATAGACC439AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
1106514774259 Cryptosporidium muris (strain RN66) cDNA library, stage oocyst Cryptosporidium muris RN66 cDNA clone 1061039178421, mRNA sequence.
FD409958.1:354-373
GACGAACCGGCCAAGGAAGAGGGAGAGACC354AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
RR2FI67JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
FD539106.1:396-415
GACGAACCGGCCAAGGAAGAGGGAGAGACC396AGTGCTGAGGCTTATAACGACGGATGGACTGAGCTCGGCTCTCACCAAAG
RR4F221JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
FD553931.1:378-397
GACGAACCGGCCAAGGAAGAGGGAGAGACC378AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
RS2G340JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD576165.1:418-437
GACGAACCGGCCAAGGAAGAGGGATAGACC418AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
RR2G758JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
FD967097.1:405-424
AACGAACCGGCCAAGGAAGAGGGAGAGACC405AGTGCTGAGGCTTATAACGACGGATGGACTGAGCTCGGCTCTCACCAAAG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF04G14, 3'-end sequence.
FY069574.1:290-309
GACGAACCGACCAAGGAAGAGGGAGAGACC290AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF07K06, 3'-end sequence.
FY070692.1:312-331
GACGAACCGACCAAGGAAGAGGGAGAGACC312AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF07P15, 3'-end sequence.
FY070808.1:356-375
GACGAACCGACCAAGGAAGAGGGAGAGACC356AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF13F18, 3'-end sequence.
FY072727.1:301-320
GACGAACCGACCAAGGAAGAGGGAGAGACC301AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF31L20, 3'-end sequence.
FY423407.1:289-308
GACGAACCGACCAAGGAAGAGGGAGAGACC289AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
SSH_Wh47 Triticum aestivum BH1146 young leaves Triticum aestivum cDNA, mRNA sequence.
GH268552.1:380-399
CGAACCGCACCAAGGAATCAGGGAGAGACC380AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
TSA: Raphanus sativus var. sativus RNA, contig: WG3_359.
FX675051.1:356-375
GACGAACCGGCCGAGGAAGAGGGAGAGACC356AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_735.
FX716102.1:363-382
GACGAACCGACCAAGGAAGAGGGAGAGACC363AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_138.
FX760728.1:421-440
GACGAACCGACCAAGGAAGAGGGAGAGACC421AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_4199.
FX767337.1:346-365
GACGAACCGGCCGAGGAAGAGGGAGAGACC346AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH001D10, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189531.2:68954-68973
GACGAACCGACCAAGGAAGAGGGAGAGACC68954AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:26910523-26910542
GACGAACCGGCCAAGGAAGAGGGAGAGACC26910523AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica napus genome assembly, chromosome: C06.
HG994370.1:20603968-20603987
GACGAACCGGCCAAGGAAGAGGGAGAGACC20603968AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG
Brassica oleracea HDEM genome, scaffold: C6.
LR031880.1:17591591-17591610
GACGAACCGGCCAAGGAAGAGGGAGAGACC17591591AGTGCTGAGGCTTATAACGACGGATGGGCTGAGCTCGGCTCTCACGACGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTGCTGAGGCTTATAACGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTGCTGAGGCTTATAACGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
3.663 | 3.654 | search_plus_done; http://172.18.8.135:50400/match?q=AGTGCTGAGGCTTATAACGA&k=0&no_gap=0&offset=0&limit=50
3.813 | 0.151 | search_minus_done; http://172.18.8.135:50400/match?q=TCGTTATAAGCCTCAGCACT&k=0&no_gap=0&offset=0&limit=0
3.813 | 0.000 | cgi_end;

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