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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:15:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:10694017-10694036
GAGATTCTAGTAGATAGAGATTGTCTAGAG10694017AGTTAACCTTGAGTGAGCCAATATTTAAAGATGATCTTGTTACTATGTTA
Felis catus Senzu DNA, chromosome: A2, American Shorthair breed.
AP023153.1:44424017-44424036
CCTACATTACAGGTTAGAAAATTGAGGTGT44424017TGGCTCACTCAAGGTTAACTGCATATTTATTGAATGAGAATTACATCTTT
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 134 unordered pieces.
FJ789657.1:431215-431234
TAACATAGTAACAAGATCATCTTTAAATAT431215TGGCTCACTCAAGGTTAACTCTCTAGACAATCTCTATCTACTAGAATCTC
Brassica napus genome assembly, chromosome: A07.
HG994361.1:18943392-18943411
TAACATAGTAACAAGATCATCTTTAAATAT18943392TGGCTCACTCAAGGTTAACTCTCTAGACAATCTCTATCTACTAGAATCTC
Brassica rapa genome, scaffold: A07.
LR031574.1:17827807-17827826
CTAACATAGTAACAAGATCATCTTTAAATA17827807TGGCTCACTCAAGGTTAACTCTCTAGACAATCTCTATCTACTAGAATCTT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:18119488-18119507
CTAACATAGTAACAAGATCATCTTTAAATA18119488TGGCTCACTCAAGGTTAACTCTCTAGACAATCTCTATCTACTAGAATCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTTAACCTTGAGTGAGCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTTAACCTTGAGTGAGCCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.209 | 0.200 | search_plus_done; http://172.18.8.135:50400/match?q=AGTTAACCTTGAGTGAGCCA&k=0&no_gap=0&offset=0&limit=50
0.316 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCTCACTCAAGGTTAACT&k=0&no_gap=0&offset=0&limit=49
0.319 | 0.004 | cgi_end;

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