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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 22:55:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Borostomias antarcticus genome assembly, chromosome: 3.
OX465206.1:5369953-5369972
ACACACATGCACACACACACAAATTAAATG5369953AGTTCTGAGGCGTTGCATTTTTCAAAACGCCGCAGTACAAATGGTGGACG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2666817-2666836
ATATGATCTTGCTGCTGCGATTAATCTGAC2666817AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2739821-2739840
ATATGATCTTGCTGCTGCGATTAATCTGAC2739821AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2659689-2659708
ATATGATCTTGCTGCTGCGATTAATCTGAC2659689AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Malus domestica Starking Delicious DNA, BAC clone SD-178_L15, complete sequence.
LC360748.1:922-941
ATATGATCTTGCTGCTGCGATTAATCTGAC922AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2769311-2769330
ATATGATCTTGCTGCTGCGATTAATCTGAC2769311AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2757958-2757977
ATATGATCTTGCTGCTGCGATTAATCTGAC2757958AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2832653-2832672
ATATGATCTTGCTGCTGCGATTAATCTGAC2832653AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2872610-2872629
ATATGATCTTGCTGCTGCGATTAATCTGAC2872610AGTTCTGAGGCGTTGCATTTGAATCAAGACTTTGGTATGTTAGCTGAACT
Erannis defoliaria genome assembly, chromosome: 11.
FR990077.1:4756988-4757007
ATTTCTTGAAGGAGTCAGCTCTCTATTAGC4756988AGTTCTGAGGCGTTGCATTTCAATACATCTTTCAGAGTAAGTCTTCAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTTCTGAGGCGTTGCATTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTTCTGAGGCGTTGCATTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.370 | 0.361 | search_plus_done; http://172.18.8.135:50400/match?q=AGTTCTGAGGCGTTGCATTT&k=0&no_gap=0&offset=0&limit=50
0.463 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=AAATGCAACGCCTCAGAACT&k=0&no_gap=0&offset=0&limit=40
0.463 | 0.000 | cgi_end;

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