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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:52:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:3423953-3423976
TCAATGTTAGTTTTGGTATTTGGATCTGTT3423953ATAACTCATGTGAGGGTGATGCAAAGAATTCATAGAAGAGAATATAACAAAACA
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:3522195-3522218
TCAATGTTAGTTTTGGTATTTGGGTCTGTT3522195ATAACTCATGTGAGGGTGATGCAAAGAATTCATAGAAGAGAATATAACAAAACA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:27855586-27855609
TGTTTTGTTATATTCTCTTCTATGAATTCT27855586TTGCATCACCCTCACATGAGTTATAACAGACCCAAATACCAAAACTAACATTGA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:28810497-28810520
TGTTTTGTTATATTCTCTTCTATGAATTAT28810497TTGCATCACCCTCACATGAGTTATAACAGATCCAAATACCAAAACTAACATTGA
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:26754098-26754121
TGTTTTGTTATATTCTGTTCTATGAATTCT26754098TTGCATCACCCTCACATGAGTTATAACAGATCCAAATACCAAAACTAACATTGA
Malus domestica genome assembly, chromosome: 8.
OU696684.1:26595997-26596020
TGTTTTGTTATATTCTCTTCTATGAATTCT26595997TTGCATCACCCTCACATGAGTTATAACAGATCCAAATACCAAAACTAACATTGA
Malus domestica genome assembly, chromosome: 8.
OU744549.1:26961663-26961686
TGTTTTGTTATATTCTCTTCTATGAATTCT26961663TTGCATCACCCTCACATGAGTTATAACAGACCCAAATACCAAAACTAACATTGA
Malus domestica genome assembly, chromosome: 8.
OU744960.1:26872962-26872985
TGTTTTGTTATATTCTCTTCTATGAATTCT26872962TTGCATCACCCTCACATGAGTTATAACAGACCCAAATACCAAAACTAACATTGA
Malus domestica genome assembly, chromosome: 8.
OU744998.1:27583214-27583237
TGTTTTGTTATATTCTGTTCTATGAATTCT27583214TTGCATCACCCTCACATGAGTTATAACAGATCCAAATACCAAAACTAACATTGA
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:40147067-40147090
TGTTTTGTTATATGCTCTTCCATGAATTCT40147067TTGCATCACCCTCACATGAGTTATAACAGATCCAAGTAATAAATTTAACATTGA
Pyrus communis genome assembly, chromosome: 15.
OY757082.1:21741004-21741027
TGTTTTGTTATATTCTCTTCCATGAATTCT21741004TTGCATCACCCTCACATGAGTTATAACAGATCCAAATACCAAAACTAACATTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATAACTCATGTGAGGGTGATGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAACTCATGTGAGGGTGATGCAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.161 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=ATAACTCATGTGAGGGTGATGCAA&k=0&no_gap=0&offset=0&limit=50
0.256 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCATCACCCTCACATGAGTTAT&k=0&no_gap=0&offset=0&limit=48
0.262 | 0.006 | cgi_end;

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