GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 00:05:31, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vicia faba genome assembly, chromosome: 5.
OX451740.1:826681830-826681849
GCATCAAGACATCAATACTCATCAAAATTC826681830ATCAATCCCCATCATACATCAATCATACATTCTCAATTCACAAACAAGAC
Vicia faba genome assembly, chromosome: 6.
OX451741.1:727695592-727695611
GCATCAAGGCATCAATATTCATCAAAATTC727695592ATCAATCCCCATCATACATCAATCATATATTCTCAATTCAAGAACAAAAC
Leucoraja naevus genome assembly, chromosome: 12.
OZ285724.1:22974810-22974829
AATTTATCACTCCCCCAACAATCATCTGCG22974810ATCAATCCCCATCATACATCTCTATGATTTACATGCCTTACTATTTCTTC
KBrH101L08R Brassica rapa BAC library KBrH Brassica rapa genomic clone KBrH101L08, genomic survey sequence.
DU118149.1:745-764
GGTGTATTGTAATTTGTTTGTTTATATTAT745GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH017L09, complete sequence.
AC241104.1:30502-30521
GGTGTATTGTAATTTGTTTGTTTATATTAT30502GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:10677883-10677902
GGTGTATTGTGATTTGTTTGTTTATATTAT10677883GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Brassica napus cultivar Xiang5A chromosome 3.
CP151898.1:10677926-10677945
GGTGTATTGTGATTTGTTTGTTTATATTAT10677926GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Brassica napus genome assembly, chromosome: A03.
HG994357.1:10603451-10603470
GGTGTATTGTAATTTGTTTGTTTATATTAT10603451GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Brassica rapa genome, scaffold: A03.
LR031572.1:10455707-10455726
GGTGTATTGTGATTTGTTTGTTTATATTAT10455707GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:10580255-10580274
GGTGTATTGTGATTTGTTTGTTTATATTAT10580255GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Ilex aquifolium genome assembly, chromosome: 2.
OX637392.1:25619665-25619684
GTTTGTGCAATGCCTCGGGAACTTTTCAAA25619665GATGTATGATGGGGATTGATGAGTGGGTTTTATACCTACGAATTGAGTAC
Brassica oleracea genome assembly, chromosome: 3.
OZ281586.1:15541310-15541329
GGTGTATTGTGATTTGTTTGTTTATATTAT15541310GATGTATGATGGGGATTGATAACGTAGTTTAATTAGATAGGATAAAAGCA
Brassica oleracea genome assembly, chromosome: 3.
OZ281586.1:15575710-15575729
GGTGTATTGTGATTTGTTTGTTTATATTAT15575710GATGTATGATGGGGATTGATAACGTAGTTTAATTAGATAGGATAAAAGCA
Brassica oleracea genome assembly, chromosome: 3.
OZ281596.1:14933800-14933819
GGTGTATTGTGATTTGTTTGTTTATATTAT14933800GATGTATGATGGGGATTGATAACGTAGTTTAATTAGATAGGATAAAAGCA
Brassica oleracea genome assembly, chromosome: 3.
OZ281596.1:14968206-14968225
GGTGTATTGTGATTTGTTTGTTTATATTAT14968206GATGTATGATGGGGATTGATAACGTAGTTTAATTAGATAGGATAAAAGCA
Brassica rapa subsp. trilocularis genome assembly, chromosome: 3.
OZ282417.1:10432949-10432968
GGTGTATTGTGATTTGTTTGTTTATATTAT10432949GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC
Brassica oleracea var. botrytis genome assembly, chromosome: 3.
OZ282428.1:14861486-14861505
GGTGTATTGTGATTTGTTTGTTTATATTAT14861486GATGTATGATGGGGATTGATAACGTAGTTTAATTTGGAAGTCTTAGACCA
Brassica oleracea var. botrytis genome assembly, chromosome: 3.
OZ282428.1:14940569-14940588
GGTGTATTGTGATTTGTTTGTTTATATTAT14940569GATGTATGATGGGGATTGATAACGTAGTTTAATTAGATAGGATAAAAGCA
Brassica oleracea var. botrytis genome assembly, chromosome: 3.
OZ282428.1:14974968-14974987
GGTGTATTGTGATTTGTTTGTTTATATTAT14974968GATGTATGATGGGGATTGATAACGTAGTTTAATTAGATAGGATAAAAGCA
Brassica rapa subsp. narinosa genome assembly, chromosome: 3.
OZ282444.1:11401140-11401159
GGTGTATTGTAATTTGTTTGTTTATATTAT11401140GATGTATGATGGGGATTGATAACGTAGTTTATTAGGTAGGGCTTTGGTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCAATCCCCATCATACATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCAATCCCCATCATACATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.272 | 0.263 | search_plus_done; http://172.18.8.135:50900/match?q=ATCAATCCCCATCATACATC&k=0&no_gap=0&offset=0&limit=50
0.471 | 0.199 | search_minus_done; http://172.18.8.135:50900/match?q=GATGTATGATGGGGATTGAT&k=0&no_gap=0&offset=0&limit=47
0.483 | 0.011 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).