GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-28 23:40:25, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lagenorhynchus albirostris genome assembly, chromosome: 1.
OX459072.1:25470866-25470885
TTTCCACCTCTATACCGGTTCCCTCTGATG25470866ATCATCTGTACTCCGACGCCAAGATCAGAACACACTGGCAGAACTAGAAT
Delphinus delphis genome assembly, chromosome: 2.
OX465327.1:25894456-25894475
TTTCCACCTCTATACCGGTTCCCTCTGATG25894456ATCATCTGTACTCCGACGCCAAGATCAGAACACACTGGCAGAACTAGAAT
Stenella coeruleoalba genome assembly, chromosome: 2.
OX596386.1:24997310-24997329
TTTCCACCTCTATACCGGTTCCCTCTGATG24997310ATCATCTGTACTCCGACGCCAAGATCAGAACACACTGGCAGAACTAGAAT
Grampus griseus genome assembly, chromosome: 2.
OZ206314.1:25448087-25448106
TTTCCACCTCTATACCGGTTCCCTCTGATG25448087ATCATCTGTACTCCGACGCCAGGATCAGAACACACTGGCAGAACTAGAAT
Globicephala melas genome assembly, chromosome: 2.
OY734040.2:152223415-152223434
ATTCTAGTTCTGCCAGTGTGTTCTGATCTT152223415GGCGTCGGAGTACAGATGATCATCAGAGGGAACCGGTATAGAGGTGGAAA
Porphyra yezoensis cDNA, clone:PFL014a09_r, 5'end.
AU191268.1:255-274
TGCCGGACCGTCGCGACGCGACCCGTACGG255GGCGTCGGAGTACAGATGATGACGCGGTCGGCCGGAAGAGCGAGGACGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCATCTGTACTCCGACGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCATCTGTACTCCGACGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50800/match?q=ATCATCTGTACTCCGACGCC&k=0&no_gap=0&offset=0&limit=50
0.147 | 0.037 | search_minus_done; http://172.18.8.135:50800/match?q=GGCGTCGGAGTACAGATGAT&k=0&no_gap=0&offset=0&limit=46
0.149 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).