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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 09:12:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 6.
OU383779.1:10375439-10375458
GTACCTGAACGGTCCCTGAGGAAAGCTGAG10375439ATCTCTCTTGGAAGTGTGGGTTTGTGCTTTTCTTATGTCTATCCAAAACA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:58297258-58297277
TTACATCTTACTTCACTATTTTTTATTTTT58297258ATCTCTCTTGGAAGTGTGGGTAGAATGAGTTTTTTTGTCAAAGGTTCAAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:58306532-58306551
TCACATCTTACTTCACAATTTTTTATTTCT58306532ATCTCTCTTGGAAGTGTGGGTAGAATGAGTGTGAATAAAAAAGCTACTAA
Musa troglodytarum cultivar karat chromosome 8.
CP097510.1:31699883-31699902
CACTTCATTCCCCACTCCGCTAGGTTCACC31699883ATCTCTCTTGGAAGTGTGGGATCAATGACCGGTCTTGCACACAGCACTTC
Oryzias latipes strain Hd-rR chromosome 4 sequence.
CP020668.1:22856468-22856487
TGGTAAAAATGAATTTCACCATTTTTGGCC22856468CCCACACTTCCAAGAGAGATGACACAACAGCAAAAGAAACCATTAAAAAA
Lotus japonicus genomic DNA, chromosome 5, clone: LjT23C14, TM0311.
AP006423.1:5570-5589
TTTAAACCTTTGACAAAAAAACTCATTCTA5570CCCACACTTCCAAGAGAGATAAAAATAAAAAATAGTGAAGTAAGATGTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCTCTCTTGGAAGTGTGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCTCTCTTGGAAGTGTGGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.365 | 0.356 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTCTCTTGGAAGTGTGGG&k=0&no_gap=0&offset=0&limit=50
0.454 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=CCCACACTTCCAAGAGAGAT&k=0&no_gap=0&offset=0&limit=46
0.455 | 0.002 | cgi_end;

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