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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:43:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Capsicum annuum MGMT_Contig749, mRNA sequence.
JW050993.1:1092-1117
GGGCAGCTATAAAATTCCGGGGAGTGGAAG1092CGGACATAAACTTTAGCTTAGAAGATTATGAATCCGACTTGAAACAGATGACAAAT
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:167631944-167631969
GGGCAGCTATAAAATTCCGGGGAGTGGAAG167631944CGGACATAAACTTTAGCTTAGAAGATTATGAATCCGACTTGAAACAGGTAATTGTG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 3.
CP124717.1:87391079-87391104
GGGCAGCTATAAAATTCCGGGGAGTGGAGG87391079CGGACATAAACTTTAGCTTAGAAGATTACGAATCCGACTTGAAACAGGTAACTGTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:168335904-168335929
GGGCAGCTATAAAATTCCGGGGAGTGGAAG168335904CGGACATAAACTTTAGCTTAGAAGATTATGAATCCGACTTGAAACAGGTAATTGTG
Capsicum annuum cultivar Maor AP2 transcription factor (AP2) mRNA, complete cds.
KM594389.1:623-648
GGGCAGCTATAAAATTCCGGGGAGTGGAAG623CGGACATAAACTTTAGCTTAGAAGATTATGAATCCGACTTGAAACAGATGACAAAT
Capsicum annuum cultivar PI527325 AP2 transcription factor (AP2) mRNA, complete cds.
KM594390.1:623-648
GGGCAGCTATAAAATTCCGGGGAGTGGAAG623CGGACATAAACTTTAGCTTAGAAGATTATGAATCCGACTTGAAACAGATGACAAAT
Capsicum annuum cultivar PI511887 AP2 transcription factor (AP2) mRNA, complete cds.
KM594391.1:623-648
GGGCAGCTATAAAATTCCGGGGAGTGGAAG623CGGACATAAACTTTAGCTTAGAAGATTATGAATCCGACTTAAAACAGATGACAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCTTCTAAGCTAAAGTTTATGTCCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCTTCTAAGCTAAAGTTTATGTCCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.099 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTTCTAAGCTAAAGTTTATGTCCG&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.053 | search_minus_done; http://172.18.8.135:50400/match?q=CGGACATAAACTTTAGCTTAGAAGAT&k=0&no_gap=0&offset=0&limit=50
0.157 | 0.005 | cgi_end;

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