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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 02:45:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Coregonus sp. 'balchen' genome assembly, chromosome: 4.
LR778256.1:1027498-1027517
AGGGGTATTGGGGGGGGGGGGGCTTAGTGA1027498ATGAGGAGTTGAATGGGCACCAAGAGAGAGACAGAGTGAGGAGAAACAAG
Dianthus caryophyllus mRNA, clone: CES05O01, 5' end sequence.
FY384318.1:78-97
GAATTAATTACCTTTAATTTGTTGTAGCAG78ATGAGGAGTTGAATGGGCACAAAATTAAGCAGCATGTGAATAATAATAGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.407.C1.
FX297298.1:77-96
GAATTAATTACCTTTAATTTGTTGTAGCAG77ATGAGGAGTTGAATGGGCACAAAATTAAGCAGCATGTGAATAATAATAGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.407.C2.
FX297299.1:181-200
CCATATTTCTCTTATCCAATGCCTTTCTAG181ATGAGGAGTTGAATGGGCACAAAATTAAGCAGCATGTGAATAATAATAGG
Apteryx australis mantelli genome assembly, scaffold: scaffold132.
LK065216.1:4355739-4355758
ACACAACGCGATGGCTTATAAAAGACACAC4355739GTGCCCATTCAACTCCTCATCATCATTCAGGCAAAAGGAGGAAGACAGGC
TSA: Dianthus caryophyllus mRNA, contig: CAK09.407.C3.
FX297300.1:313-332
CCTATTATTATTCACATGCTGCTTAATTTT313GTGCCCATTCAACTCCTCATCTAGAAAGGCATTGGATAAGAGAAATGTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGAGGAGTTGAATGGGCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAGGAGTTGAATGGGCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.427 | 0.418 | search_plus_done; http://172.18.8.135:50400/match?q=ATGAGGAGTTGAATGGGCAC&k=0&no_gap=0&offset=0&limit=50
0.539 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=GTGCCCATTCAACTCCTCAT&k=0&no_gap=0&offset=0&limit=46
0.541 | 0.001 | cgi_end;

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