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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-03-07 08:52:44, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

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BOGXA05TF BOGX Brassica oleracea genomic clone BOGXA05, genomic survey sequence.
BH509598.1:402-421
AGACACCTGGGGACTGGACTGGGTATGCTA402ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
BOT01-19O3TF BOT01 Brassica oleracea genomic clone BOT01-19O3, genomic survey sequence.
FI687121.1:256-275
AAACACCTGGGGACTGGACTGGGTATGCTA256ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
Brassica napus cultivar Xiang5A chromosome 18.
CP151913.1:43588248-43588267
AGACACCTGGGGACTGGACTGGGTATGCTA43588248ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
Brassica napus genome assembly, chromosome: C08.
HG994372.1:30593683-30593702
AGACACCTGGGGACTGGACTGGGTATGCTA30593683ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:39880416-39880435
AGACACCTGGGGACTGGACTGGGTATGCTA39880416ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
Raphanus sativus genome assembly, chromosome: 5.
OY743211.1:30858017-30858036
AGACACCAGGGGACTGAACTGGGTAAGCTA30858017ATGCACTGTCGTAGTGTTCCATTCCGGAGGCAGCGGGTTTCACTCCACCC
Cardamine flexuosa genome assembly, chromosome: 5.
OY743218.1:21891196-21891215
AGACACCTGGAGATTGAACTGGGTATGCTA21891196ATGCACTGTCGTAGTGTTCCATTCCTGATGCAGCAGGTTTAACTCCACCC
Cardamine hirsuta genome assembly, chromosome: 5.
OZ156422.1:22255041-22255060
AGACACCTGGAGATTGAACTGGGTATGCTA22255041ATGCACTGTCGTAGTGTTCCATTCCTGATGCAGCAGGTTTAACTCCACCC
Brassica nigra genome assembly, chromosome: 1.
OZ173171.1:60870589-60870608
TGACACCTGGGGACTGAACTGGGTATGCTA60870589ATGCACTGTCGTAGTGTTCCATACCGGAAGCAGCGGGTTTGACTCCACCC
Draba verna genome assembly, chromosome: 6.
OZ174223.1:44680587-44680606
TGACACCAGGGGACTGAACTGGGTACGCTA44680587ATGCACTGTCGTAGTGTTCCATTCCTGAAGCAGCGGGTTTAACTCCGCCC
Draba verna genome assembly, chromosome: 18.
OZ174235.1:28711023-28711042
TGACACCGGGGGACTGAACTGGGTACGCTA28711023ATGCACTGTCGTAGTGTTCCATTCCAGAAGCAGCGGGTTTAACTCCTCCC
Brassica oleracea genome assembly, chromosome: 8.
OZ281591.1:41474045-41474064
AGACACCTGGGGACTGGACTGGGTATGCTA41474045ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
Brassica oleracea genome assembly, chromosome: 8.
OZ281601.1:48794950-48794969
AGACACCTGGGGACTGGACTGGGTATGCTA48794950ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
Brassica rapa subsp. trilocularis genome assembly, chromosome: 9.
OZ282423.1:53852395-53852414
AGACACCTGGGGACTGGACTGGGTATGCTA53852395ATGCACTGTCGTAGTGTTCCATACCGGAAGCAGCGGGTTTCACTCCGCCC
Brassica oleracea var. botrytis genome assembly, chromosome: 8.
OZ282433.1:42072436-42072455
AGACACCTGGGGACTGGACTGGGTATGCTA42072436ATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCC
Brassica rapa subsp. narinosa genome assembly, chromosome: 9.
OZ282450.1:52658575-52658594
AGACACCTGGGGACTGGACTGGGTATGCTA52658575ATGCACTGTCGTAGTGTTCCATACCGGAAGCAGCGGGTTTCACTCCGCCC
58ACPE48_UP_018_A09_21SEP2004_079 Brassica napus seed library Brassica napus cDNA 5', mRNA sequence.
EE418438.1:3-22
AT3GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
BR009604 callus cDNA library KBCG Brassica rapa subsp. pekinensis cDNA clone KBCG-014H09 5', mRNA sequence.
EX024960.1:225-244
GGGCGGAGTGAAACCCGCTGCTTCCGGTAT225GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
BR020411 callus cDNA library KBCG Brassica rapa subsp. pekinensis cDNA clone KBCG-176E11 5', mRNA sequence.
EX035767.1:84-103
GGGCGGAGTGAAACCCGCTGCTTCCGGTAT84GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
RS1CV68TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EX890662.1:164-183
GGGTGGGGTGAAACCCGCTGCTTCCGGAAT164GGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCT
RR2FM43TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD543536.1:439-458
GGGTGGAGTGAAACCCGCTGCCTCCGGGAT439GGAACACTACGACAGTGCATTAGCACCCAGTTCAGTCCCCTGGTGTCTTA
RS1GK12TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD939971.1:93-112
GGGTGGAGTGAAACCCGCTGCTTCCGGAAT93GGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCT
Raphanus sativus mRNA, clone: RSCS01I05, 5' end sequence.
FY446380.1:100-119
GGGTGGGGTGAAACCCGCTGCTTCCGGAAT100GGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCT
Raphanus sativus mRNA, clone: RSCS20F15, 5' end sequence.
FY453004.1:288-307
GGGTGGGGTGAAACCCGCTGCTTCCGGAAT288GGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCT
CCPd_EST_345 Piriformospora indica colonized with Chinese cabbage roots library Brassica rapa subsp. chinensis cDNA, mRNA sequence.
JZ469520.1:327-346
GGGCGGAGTGAAACCCGCTGCTTCCGGTAT327GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
CCPd_EST_972 Piriformospora indica colonized with Chinese cabbage roots library Brassica rapa subsp. chinensis cDNA, mRNA sequence.
JZ470064.1:297-316
GGGCGGAGTGAAACCCGCTGCTTCCGGTAT297GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
TSA: Raphanus sativus var. sativus RNA, contig: WG3_11960.
FX657535.1:1097-1116
GGGTGGAGTGAAACCCGCTGCCTCCGGAAT1097GGAACACTACGACAGTGCATTAGCTTACCCAGTTCAGTCCCCTGGTGTCT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_732.
FX693794.1:1050-1069
GGGCGGAGTGAAACCCGCTGCTTCCGGTAT1050GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_2196.
FX726845.1:1028-1047
GGGCGGAGTGAAACCCGCTGCTTCCGGTAT1028GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_128.
FX727747.1:1094-1113
GGGTGGAGTGAAACCCGCTGCCTCCGGAAT1094GGAACACTACGACAGTGCATTAGCTTACCCAGTTCAGTCCCCTGGTGTCT
TSA: Raphanus sativus RS09256 mRNA sequence.
JT793803.1:2213-2232
GGGTGGGGTGAAACCCGCTGCTTCCGGAAT2213GGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCT
TSA: Raphanus sativus RS09257 mRNA sequence.
JT793804.1:1069-1088
GGGTGGGGTGAAACCCGCTGCTTCCGGAAT1069GGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCT
obv12d02.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH947182.1:150-169
GGGCGGAGTGAAACCCGCAGCTTCCGGTAT150GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB073E19, complete sequence.
AC189457.2:59570-59589
GGGCGGAGTGAAACCCGCTGCTTCCGGTAT59570GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:11128276-11128295
GGGCGGAGTGAAACCCGCAGCTTCCGGTAT11128276GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
Raphanus sativus genome assembly, chromosome: 4.
LR778313.1:13174933-13174952
GGGTGGAGTGAAACCCGCTGCCTCCGGAAT13174933GGAACACTACGACAGTGCATTAGCTTACCCAGTTCAGTCCCCTGGTGTCT
B.oleracea putative imbibition protein mRNA.
X79330.1:1134-1153
GGGCGGAGTGAAACCCCGAGCTTCCGGTAT1134GGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCT
Eupithecia vulgata genome assembly, chromosome: 5.
OX297864.1:13265934-13265953
GGTGCGGCGTAGCCAAGGCTACGAAGGTAC13265934GGAACACTACGACAGTGCATTTATAATATAAATAAATAATATAAATAATA
Chamelea gallina genome assembly, chromosome: 10.
OZ248320.1:43777212-43777231
AACTTTACATTACCACAGCTTCCCATCGGC43777212GGAACACTACGACAGTGCATGTACGGAAATGCAGCCCTAGAGTAATAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCACTGTCGTAGTGTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCACTGTCGTAGTGTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.463 | 0.454 | search_plus_done; http://172.18.8.135:50900/match?q=ATGCACTGTCGTAGTGTTCC&k=0&no_gap=0&offset=0&limit=50
1.445 | 0.983 | search_minus_done; http://172.18.8.135:50900/match?q=GGAACACTACGACAGTGCAT&k=0&no_gap=0&offset=0&limit=34
1.461 | 0.016 | cgi_end;

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