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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-03-10 09:08:39, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Comarum palustre genome assembly, chromosome: 2.
OX637573.1:258744-258762
GAAAGTAAGGAATCTCTAATTCGAGTAGAA258744ATGCCTCTCATCTGTAAACTCCTCAATCAAGCTTGTGCCAAGAGCTCAA
Rosa spinosissima genome assembly, chromosome: 14.
OZ218479.1:244168-244186
TAAACCCCCCACAATCTAATTCGTAAAGAA244168ATGCCTCTCATCTGTAAACTCCCCCAATCAAGCTTGGGCCCAAAGCTCG
Succisa pratensis genome assembly, chromosome: 5.
OZ243861.1:130875109-130875127
TGATTTAAGACCCACCGCTTGCAAACGCGG130875109ATGCCTCTCATCTGTAAACTTCTCCATTACCTTCATCCTCCTACACAAA
Haemonchus contortus strain NZ_Hco_NP chromosome 3.
CP035802.1:66277244-66277262
GGCCAAAGCCGCTTGCCCTTGATCTGTCCG66277244ATGCCTCTCATCTGTAAACGGGGTTCTTCTTCAGGCAGAATATTCTGGA
Stegodyphus sarasinorum isolate Ssar_Unkown_A chromosome 11.
CP160519.1:33244718-33244736
GAGAAAAAAAGGACATTAATAGGGTATGTA33244718ATGCCTCTCATCTGTAAACAAAGTTTACGCTTTGGGACCATGCTTTCAA
Argiope bruennichi genome assembly, chromosome: 2.
OX387440.1:141830978-141830996
AAATAATTTTTGAAAGTTCATAATTACATT141830978ATGCCTCTCATCTGTAAACTAAAAATACAAAAGGAAAACCCACTTTATC
Eledone cirrhosa genome assembly, chromosome: 3.
OZ024742.1:64453227-64453245
TATTATTATTATGTTAAATTTGAAAGTCCT64453227ATGCCTCTCATCTGTAAACTAGAAATAACTCCAAATTTTCCCCAAATCT
Scythris empetrella genome assembly, chromosome: 27.
OZ203861.1:7448563-7448581
GTTACATGAGTTGATTAGGCTCTCTACACG7448563ATGCCTCTCATCTGTAAACGAGATGAAAGAAAAAGGGAAGACCAACATG
Embia tyrrhenica genome assembly, chromosome: 10.
OZ286561.1:15796211-15796229
CTACGACTGGAAATATTTCAAAGCAAGTAC15796211ATGCCTCTCATCTGTAAACTCTATTTCAAGCTCCTCAAGTTTCGGACAC
Sparus aurata genome assembly, chromosome: 5.
LR537125.1:6915065-6915083
TTCAGAAAAATGGCTCGCAGCCATTTCCAC6915065ATGCCTCTCATCTGTAAACAAGAGTCTTTCCTAACAAGAAGTCGGGCTG
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 5.
LR884464.1:4404167-4404185
TTCAGAAAAATGGCTCGCAGCCATTTCCAC4404167ATGCCTCTCATCTGTAAACAAGACGTTTTCCTAACAAGAAGTCAGGCTG
Cyclopterus lumpus genome assembly, chromosome: 2.
OY735149.1:10742518-10742536
TTGGGGGAAATGGCTCGCAGCCATTTCCGC10742518ATGCCTCTCATCTGTAAACAAGTGTCCTTTCCTAACAAGTTACCAAGCT
Diplodus puntazzo genome assembly, chromosome: 5.
OZ023159.1:6835307-6835325
TTCAGAAAAATGGCTTGCAGCCATTTCCAC6835307ATGCCTCTCATCTGTAAACAAAACTCTTTCCTAACAAGAGGTCAGGCTG
Anser fabalis genome assembly, chromosome: Z.
OZ252503.1:42862928-42862946
CTTAAACACTATCAAATATGAGGCATTAAA42862928ATGCCTCTCATCTGTAAACAGCTAGGTGAAACAGAAATATAAATTACAA
Anser erythropus genome assembly, chromosome: Z.
OZ256099.1:43114851-43114869
CTTAAACACTATCAAATATGAGGCATTAAA43114851ATGCCTCTCATCTGTAAACAGCTAGGTGAAACAGAAATATAAATTACAA
Pinus pinaster xylem EST, clone PP020E04.
BX249143.1:168-186
TGAACATGAACATGAACATGAACAGTGGCG168GTTTACAGATGAGAGGCATGCTCGGCCGGAATGCTGGAGGGAGAACGGG
Pinus pinaster xylem EST, clone PP031B04.
BX249992.1:417-435
TGAACATGAACATGAACATGAACAGTGGCG417GTTTACAGATGAGAGGCATGCTCGGCCGGAATGCTGGAGGGAGAACGGG
EST841107 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIAL691 5' end, mRNA sequence.
CO410722.1:74-92
TGAACATGAACATGAACATGAACAGTGGCG74GTTTACAGATGAGAGGCATGCTCGGCCGGAATGCTGGAGGGAGAACGGG
EST844865 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIAMO92 5' end, mRNA sequence.
CO414480.1:74-92
TGAACATGAACATGAACATGAACAGTGGCG74GTTTACAGATGAGAGGCATGCTCGGCCGGAATGCTGGAGGGAGAACGGG
EST942593 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIBL71 5' end, mRNA sequence.
DN446794.1:74-92
TGAACATGAACATGAACATGAACAGTGGCG74GTTTACAGATGAGAGGCATGCTCGGCCGGAATGCTGGAGGGAGAACGGG
EST960996 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIJM30 5' end, mRNA sequence.
DN465197.1:625-643
TGAACATGAACATGAACATGAACAGTGGCG625GTTTACAGATGAGAGGCATGCTCGGCCGGAATGCTGGAGGGAGAACGGG
EST1157501 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMA146 5' end, mRNA sequence.
DT625577.1:39-57
TGAACATGAACATGAACATGAACAGTGGCG39GTTTACAGATGAGAGGCATGCTCGGCCGGAATGCTGGAGGGAGAACGGG
Comarum palustre genome assembly, chromosome: 16.
OX637587.1:19911990-19912008
TTGAGCTATTGGCACAAGCTTGATTGAGGA19911990GTTTACAGATGAGAGGCATTTCTACTTGAATTAGAAATGGATAGAAATC
Lemna minuta genome assembly, chromosome: 2.
OZ204781.1:16009976-16009994
GTTTATAAATGAGTATTTTTTAGAATTCTT16009976GTTTACAGATGAGAGGCATGCATGACAAAAAATCCAGATTATGATATGC
Stegodyphus sarasinorum isolate Ssar_Unkown_A chromosome X1.
CP160514.1:42082824-42082842
ACATCTAGATACTCGTAAAAGTCATTAATT42082824GTTTACAGATGAGAGGCATGAAGAATGAAATAGGATCTCATGAGGCTGA
Stegodyphus bicolor isolate Sbic_Betta_A chromosome X1.
CP160569.1:44391808-44391826
ACATCTAGATACTCGTAAAAGTCATTAATT44391808GTTTACAGATGAGAGGCATGAAGAATGAAATAGAATCTCATGAGGCTGA
Noctua pronuba genome assembly, chromosome: W.
LR999892.1:11213734-11213752
TATGCAAAGGAATAAAGTAAATATTTCGTT11213734GTTTACAGATGAGAGGCATGTAAAAAGTCATGTCATTTGGTACCATTGA
Ypsolopha scabrella genome assembly, chromosome: Z.
OU342960.1:14774021-14774039
GGTAGAACCACCAATATAGATGCAGACTTT14774021GTTTACAGATGAGAGGCATTTGGTTTATATGTACATATTATAACATGAA
Sphaerium corneum genome assembly, chromosome: 5.
OZ246064.1:207503731-207503749
TCATCTTTGAATTCGACGGACTGCCAACGT207503731GTTTACAGATGAGAGGCATACTAGAGTCATCTTTGAATTCGACGGACTG
Embia tyrrhenica genome assembly, chromosome: 10.
OZ286561.1:11981978-11981996
GTGTCCTAAACTTGAGGAGCTTGAAATAGA11981978GTTTACAGATGAGAGGCATGTACTTGCTTTGAAACATTTTGCCTGCCTC
Embia tyrrhenica genome assembly, chromosome: 10.
OZ286561.1:12507009-12507027
GTGTCCGAAACTTGAGGAGCTTGAAATAGA12507009GTTTACAGATGAGAGGCATGAACTTGCTTTGAAACATTTTGCCTGCCTC
Embia tyrrhenica genome assembly, chromosome: 10.
OZ286561.1:12539501-12539519
GTGTCCGAAACTTGAGGAGCTTGAAATAGA12539501GTTTACAGATGAGAGGCATGTACTTGCTTTGAAACATTTTGCCTGCCTC
Psittacula echo genome assembly, chromosome: 7.
OY725427.1:30194102-30194120
CCTAACCATAATTGATTTTCTTCTGCAGTA30194102GTTTACAGATGAGAGGCATGGTCTCCCCCTCTCTTCCCACCTCCTTTCC
Anser brachyrhynchus genome assembly, chromosome: Z.
OZ035889.1:35684975-35684993
TTGTAATTTATATTTCTGTTTCACCTAGCT35684975GTTTACAGATGAGAGGCATTTTAATGCCTCATATTTGATAGTGTTTAAG
Anser anser genome assembly, chromosome: Z.
OZ124259.1:45341760-45341778
TTGTAATTTATATTTCTGTTTCACCTAGCT45341760GTTTACAGATGAGAGGCATTTTAATGCCTCATATTTGATAGTGTTTAAG
Cygnus columbianus genome assembly, chromosome: Z.
OZ223797.1:41916681-41916699
TTGTAATTTGTATTCCTGTTTCACCTAGCT41916681GTTTACAGATGAGAGGCATTTTAATGCCTCATATTTAATAGTGTTTAAG
Branta canadensis genome assembly, chromosome: Z.
OZ246751.1:45735964-45735982
TTGTAATTTATATTTCTGTTTCACCTAGCT45735964GTTTACAGATGAGAGGCATTTTAATGCCTCATATTTGATAGTGTTTAAG
Spondyliosoma cantharus genome assembly, chromosome: 10.
OZ251588.1:28639840-28639858
CAGCCTGACCACTTATTAGGAAAGAGTCTT28639840GTTTACAGATGAGAGGCATGTGGAAATGGCTGCGAGCCATTTTTCTGAA
Cygnus cygnus genome assembly, chromosome: Z.
OZ257029.1:44718865-44718883
TTGTAATTTGTATTCCTGTTTCACCTAGCT44718865GTTTACAGATGAGAGGCATTTTAATGCCTCATATTTAATAGTGTTTAAG
Branta leucopsis genome assembly, chromosome: Z.
OZ284605.1:50810063-50810081
TTGTAATTTATATTCCTGTTTCACCTAGCT50810063GTTTACAGATGAGAGGCATTTTAATGCCTCATATTTGATAGTGTTTAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCCTCTCATCTGTAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCCTCTCATCTGTAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.375 | 0.366 | search_plus_done; http://172.18.8.135:50900/match?q=ATGCCTCTCATCTGTAAAC&k=0&no_gap=0&offset=0&limit=50
0.753 | 0.378 | search_minus_done; http://172.18.8.135:50900/match?q=GTTTACAGATGAGAGGCAT&k=0&no_gap=0&offset=0&limit=35
0.771 | 0.017 | cgi_end;

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