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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:38:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Fissipunctia ypsillon genome assembly, chromosome: 25.
OX387669.1:10528479-10528498
GTGCTTTCCGAGGCACGGAGGAGTCTCGAT10528479ATGTAATGAATGGAATTCTGTCGCGACAATATGAATGAATTGTGTTCTCT
Ostrinia nubilalis genome assembly, chromosome: 22.
OY979756.1:3087889-3087908
AAATGAAGGTTTTATTTATTGTGAACATTA3087889ATGTAATGAATGGAATTCTGCACTTATCGGCTCGATCGGTGTTATTTTCT
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:785927515-785927534
CATGCATGGGAAATGGACCCTCAAATGAAA785927515CAGAATTCCATTCATTACATTTCACCCATTTGATTCAAATGAATGCACAT
Scyliorhinus canicula genome assembly, chromosome: 20.
LR744049.1:2976104-2976123
ACATTATGGAATGATTGTTAACTTGAACTA2976104CAGAATTCCATTCATTACATAGAACATAGAACATACAGTGCAGAAGGAGG
Podarcis cretensis genome assembly, chromosome: Z.
OX638163.1:32863936-32863955
TTTCCACATTTCTGGTCCCTTCCCCTTTTC32863936CAGAATTCCATTCATTACATTCAGTAATGGGTTAATTACCAGCTTCTGTA
Stenodema calcarata genome assembly, chromosome: 8.
OY986055.1:17857691-17857710
ATCGAAGGCCTTAGCCAGACCTAAGAGGAC17857691CAGAATTCCATTCATTACATCGGGGACCTGACTACTGCCGCACCTACCGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGTAATGAATGGAATTCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTAATGAATGGAATTCTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.192 | 0.183 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTAATGAATGGAATTCTG&k=0&no_gap=0&offset=0&limit=50
0.298 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAATTCCATTCATTACAT&k=0&no_gap=0&offset=0&limit=48
0.301 | 0.003 | cgi_end;

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