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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:29:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Lactuca serriola Serrassy_T_P2_7970 mRNA sequence.
JO021945.1:1443-1462
CACGTATTCATCTGTTGGTGTTTCTGAATC1443ATTCAGTGCGTCTGTTGCAGAAACTAAAGTGTAATCTTCATCTGTTCCAG
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:135626718-135626737
CACATAATCATCATTTGGTGACTCTGAATC135626718ATTCAGTGCGTCTGTTGCAGAGACCAAAGTGTAACCTTTATCTGTTCCCG
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:29523364-29523383
TACGTATTCATCTGTTGGTGTTTCTGAATC29523364ATTCAGTGCGTCTGTTGCAGAAACTAAAGTGTAATCTTCATCTGTTCCAG
Pholis gunnellus genome assembly, chromosome: 24.
OU342827.1:7104188-7104207
AGAGGACACCGTTCACTGTGTGGCTCCCCG7104188CTGCAACAGACGCACTGAATCATCTGTGACAGGTGGAGTACTGCATGGCT
QGC14B24.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC14B24, mRNA sequence.
BQ859837.1:453-472
CTGGAACAGATGAAGATTACACTTTAGTTT453CTGCAACAGACGCACTGAATGATTCAGAAACACCAACAGATGAATACGTG
QGG17H24.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG17H24, mRNA sequence.
BQ997816.1:171-190
CTGGAACAGATGAAGATTACACTTTAGTTT171CTGCAACAGACGCACTGAATGATTCAGAAACACCAACAGATGAATACGTG
TSA: Lactuca sativa Letassy_X1_18353 mRNA sequence.
JI575247.1:1558-1577
CTGGAACAGATGAAGATTACACTTTAGTTT1558CTGCAACAGACGCACTGAATGATTCAGAAACACCAACAGATGAATACGTG
Protula sp. h YS-2021 genome assembly, chromosome: 10.
OX457033.1:7751339-7751358
GAGAGTTGCCATGTTAACAAAATCAGGTGT7751339CTGCAACAGACGCACTGAATATACCAATCCACAACACATCGCCGAATAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTCAGTGCGTCTGTTGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTCAGTGCGTCTGTTGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.153 | 0.144 | search_plus_done; http://172.18.8.135:50400/match?q=ATTCAGTGCGTCTGTTGCAG&k=0&no_gap=0&offset=0&limit=50
0.257 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCAACAGACGCACTGAAT&k=0&no_gap=0&offset=0&limit=47
0.260 | 0.004 | cgi_end;

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