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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 17:35:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense DNA, clone:RC0174f.ab1.
DE244903.1:512-531
CTCAAGAAGATACCATCATGTCTGATGCAA512CTCCTGATCCACCAAGCAATGTACCCCAGAGAGATACTGTTTAAGAGGTA
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737410.1:298647818-298647837
CTTCAAGAGGCTCCTCTAGACGTTGAGGCG298647818CTCCTGATCCACCAAGCAATGCACTTCCGTGCAAGCTCCTGCAGTGTACT
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737417.1:300229219-300229238
CTTCAAGAGGCTCCTCTAGACGTTGAGGCG300229219CTCCTGATCCACCAAGCAATGCACTTCCGTGCAAGCTCCTGCAGTGTACT
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737435.1:286752484-286752503
CTTCAAGAGGCTCCTCTAGACGTTGAGGCG286752484CTCCTGATCCACCAAGCAATGCACTTCCGTGCAAGCTCCTGCAGTGTACT
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737475.1:273967043-273967062
CTTCTAGAGGCTCCTCTAGACGTTGAGGCG273967043CTCCTGATCCACCAAGCAATGCACTTCCGTGCAAGCTCCTGCAGTGTACT
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737497.1:272549211-272549230
CTTCTAGAGGCTCCTCTAGACGTTGAGGCG272549211CTCCTGATCCACCAAGCAATGCACTTCCGTGCAAGCTCCTGCAGTGTACT
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737881.1:277730568-277730587
CTTCTAGAGGCTCCTCTAGACGTTGAGGCG277730568CTCCTGATCCACCAAGCAATGCACTTCCGTGCAAGCTCCTGCAGTGTACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTGCTTGGTGGATCAGGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTGCTTGGTGGATCAGGAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.356 | 0.348 | search_plus_done; http://172.18.8.135:50400/match?q=ATTGCTTGGTGGATCAGGAG&k=0&no_gap=0&offset=0&limit=50
0.470 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCTGATCCACCAAGCAAT&k=0&no_gap=0&offset=0&limit=50
0.474 | 0.005 | cgi_end;

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