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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 02:43:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST692341 Coccidioides posadasii saprobic phase cDNA library, greater than 4kb Coccidioides posadasii cDNA clone CIBAJ60 5' end, mRNA sequence.
CF814959.1:177-196
TTTCCAAATATTTCTCGCGATTTGGCCCAT177ATTTGGCAAGTTTTCATCGCATTGCATGTCGGCACCAAATTCATTCCCTC
G872P59RD17.T0 C. posadasii Silveira, MYCELIAL_NORMALIZED Coccidioides posadasii cDNA, mRNA sequence.
GH402170.1:366-385
TTTCCAAATATTTCTCGCGATTTGGCCCAT366ATTTGGCAAGTTTTCATCGCATTGCATGTCGGCACCAAATTCATTCCCTC
Coccidioides posadasii str. Silveira chromosome 2.
CP075069.1:7255400-7255419
TTTCCAAATATTTCTCGCGATTTGGCCCAT7255400ATTTGGCAAGTTTTCATCGCATTGCATGTCGGCACCAAATTCATTCCCTC
Platycnemis pennipes genome assembly, chromosome: 6.
OW121852.1:83354701-83354720
ATGAAAATCAAGATAAACTCATTGCTGGTA83354701ATTTGGCAAGTTTTCATCGCTTCATTTTGAGAATAATAAATAGATAAGAA
EST692340 Coccidioides posadasii saprobic phase cDNA library, greater than 4kb Coccidioides posadasii cDNA clone CIBAJ60 3' end, mRNA sequence.
CF814958.1:673-692
GAGGGAATGAATTTGGTGCCGACATGCAAT673GCGATGAAAACTTGCCAAATATGGGCCAAATCGCGAGAAATATTTGG
EST696789 Coccidioides posadasii saprobic phase cDNA library, greater than 4kb Coccidioides posadasii cDNA clone CIBBA49 5' end, mRNA sequence.
CF819407.1:676-695
GAGGGAATGAATTTGGTGCCGACATGCAAT676GCGATGAAAACTTGCCAAATATGGGCCAAATCGCG
EST785480 Coccidioides posadasii saprobic phase cDNA library, greater than 4kb Coccidioides posadasii cDNA clone CIBBG46 3' end, mRNA sequence.
CO015098.1:29-48
GGGAATGAATTTGGTGCCGACATGCAAT29GCGATGAAAACTTGCCAAATATGGGCCAAATCGCGAGAAAATATTTGGAA
Dianthus caryophyllus mRNA, clone: CES05M13, 5' end sequence.
FY384282.1:260-279
GAATAATAAAGCAGGTGGAGTATTATTTCA260GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Dianthus caryophyllus mRNA, clone: CES12G23, 5' end sequence.
FY386801.1:110-129
GAATAATAAAGCAGGTGGAGTATTATTTCA110GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Dianthus caryophyllus mRNA, clone: CES23L15, 5' end sequence.
FY391056.1:235-254
AAATAATAAAGCAGGTGGAGTATTACTTCA235GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Dianthus caryophyllus mRNA, clone: CFES03B09, 5' end sequence.
FY394959.1:247-266
AAATAATAAAGCAGGTGGAGTATTACTTCA247GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Dianthus caryophyllus mRNA, clone: CFES03G18, 5' end sequence.
FY395087.1:247-266
AAATAATAAAGCAGGTGGAGTATTACTTCA247GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Dianthus caryophyllus mRNA, clone: CFES11I09, 5' end sequence.
FY398147.1:248-267
GAATAATAAAGCAGGTGGAGTATTATTTCA248GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Dianthus caryophyllus mRNA, clone: CFES11I11, 5' end sequence.
FY398149.1:248-267
GAATAATAAAGCAGGTGGAGTATTATTTCA248GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Dianthus caryophyllus mRNA, clone: CFES23P17, 5' end sequence.
FY402808.1:253-272
AAATAATAAAGCAGGTGGAGTATTACTTCA253GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
TSA: Dianthus superbus Ds_CL517Contig1 mRNA sequence.
JL383675.1:224-243
AAATAATAAAGCAGGTGGAGTATTACTTCA224GCGATGAAAACTTGCCAAATGACAAGTTCTTGTTGAAATACTTGAACAAA
Tachina lurida genome assembly, chromosome: 3.
OX101754.1:159617450-159617469
TACAATCTAAGAGGAAGGAATTCTTGGCAT159617450GCGATGAAAACTTGCCAAATTTCTAAAATCATGTGGAGCTCCTATGATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATTTGGCAAGTTTTCATCGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATTTGGCAAGTTTTCATCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.477 | 0.468 | search_plus_done; http://172.18.8.135:50400/match?q=ATTTGGCAAGTTTTCATCGC&k=0&no_gap=0&offset=0&limit=50
1.386 | 0.909 | search_minus_done; http://172.18.8.135:50400/match?q=GCGATGAAAACTTGCCAAAT&k=0&no_gap=0&offset=0&limit=46
1.394 | 0.008 | cgi_end;

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