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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 17:04:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Cajanus cajan cultivar UPAS 120 contig29157.UPAS mRNA sequence.
EZ646874.1:503-527
TGATTAAATTTTCAAAATAGATTTGTCAAT503AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Cajanus scarabaeoides chloroplast, complete genome.
KU729878.1:30863-30887
TGATTAAATTTTCAAAATAGATTTGTCAAT30863AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Cajanus cajan chloroplast, complete genome.
KU729879.1:30864-30888
TGATTAAATTTTCAAAATAGATTTGTCAAT30864AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Cajanus reticulatus isolate E657 trnD-trnY intergenic spacer, partial sequence; tRNA-Tyr (trnY) gene, trnY-trnE intergenic spacer, and tRNA-Glu (trnE) gene, complete sequence; and trnE-trnT intergenic
KX213343.1:1207-1231
TGATTAAATTTTCAAAATAGATTTGTCAAT1207AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Cajanus scarabaeoides isolate E658 trnD-trnY intergenic spacer, partial sequence; tRNA-Tyr (trnY) gene, trnY-trnE intergenic spacer, and tRNA-Glu (trnE) gene, complete sequence; and trnE-trnT intergen
KX213344.1:1206-1230
TGATTAAATTTTCAAAATAGATTTGTCAAT1206AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Rhynchosia clivorum isolate E511 trnD-trnY intergenic spacer, partial sequence; tRNA-Tyr (trnY) gene, trnY-trnE intergenic spacer, and tRNA-Glu (trnE) gene, complete sequence; and trnE-trnT intergenic
KX213346.1:1255-1279
TGATTCCTTTTTAAAAATCGATTTGTCAAT1255AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Flemingia strobilifera isolate E190 trnD-trnY intergenic spacer, partial sequence; tRNA-Tyr (trnY) gene, trnY-trnE intergenic spacer, and tRNA-Glu (trnE) gene, complete sequence; and trnE-trnT interge
KX213352.1:1243-1267
TGATTCCATTTTCAAAATAGATTTGTCAAT1243AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGAAATATATCTATCT
Cajanus cajan chloroplast, complete genome.
KX672004.1:31605-31629
TGATTAAATTTTCAAAATAGATTTGTCAAT31605AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Cajanus crassus chloroplast, complete genome.
MN936098.1:31305-31329
TGATTAAATTTTCAAAATAGATTTGTCAAT31305AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATCGATATATATCTATCT
Dunbaria nivea chloroplast, complete genome.
MN966627.1:31396-31420
TGATTCAATTTTCAAAATCGATTTGTCAAT31396AACAAACGTAATCTGTGTTGATCTCACTAAAGTGGATATAGATCTATATCTATCT
TSA: Cajanus cajan cultivar Asha contig31843.Asha mRNA sequence.
EZ679707.1:114-138
AGATAGATATATATCGATATCCACTTTAGT114GAGATCAACACAGATTACGTTTGTTATTGACAAATCTATTTTGAAAATTTAATCA
60-L026093.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 3', genomic survey sequence.
CZ445521.1:412-436
AGATAGATATATATCGATATCCACTTTAGT412GAGATCAACACAGATTACGTTTGTTATTGACAAATCTATTTTGAAAATTTAATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/Aacaaacgtaatctgtgttgatctc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : Aacaaacgtaatctgtgttgatctc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.370 | 0.361 | search_plus_done; http://172.18.8.135:50400/match?q=AACAAACGTAATCTGTGTTGATCTC&k=0&no_gap=0&offset=0&limit=50
0.500 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=GAGATCAACACAGATTACGTTTGTT&k=0&no_gap=0&offset=0&limit=40
0.501 | 0.002 | cgi_end;

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