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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:05:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Camellia sinensis Singletons43930.Casi mRNA sequence.
HP756577.1:140-159
TAAACCTTAACAGGTGACTGTTGTGTAAAT140CAAATAGAGGCAATTCACCAACCCACAATTACAGAGAGAGAGAGAGAGAG
Scyliorhinus canicula genome assembly, chromosome: 4.
LR744033.1:137502406-137502425
TACTGATCACAGACAGGTCCTCGGAGAGGC137502406TGGTGAATTGCCTCTATTTGTAGTGGAAACGTTTCTCCGACCCCTTGATG
Camellia sinensis mRNA, clone: ML25C04, 5' end sequence, expressed in mature leaves.
FS947390.1:714-733
TCTGTAGTATGATTGTTTGTAATTGTGGGT714TGGTGAATTGCCTCTATTTGATTTACACAACAGTCACCTGTTAAGGTTTA
EST2758 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 08010904-OUYI_CHAG_31_38.M13+_F05, mRNA sequence.
GE652431.1:780-799
CTCTCTCTCTCTCTCTCTGTAATTGTGGGT780TGGTGAATTGCCTCTATTTGATTTACACAACAGTCACCTGTTAAGGGTTT
Chionographis japonica genome assembly, chromosome: 5.
OX393553.1:9429617-9429636
AAGCGGGCTTGACCACTTTCCAATAACTTG9429617TGGTGAATTGCCTCTATTTGCTGCAGAACACCTACCACTGCCCAGTGTTG
Viscum album genome assembly, chromosome: 1_6.
OY728124.1:51080533-51080552
GGGGCAGCAGGGGCAGGCACAAATTCCCCT51080533TGGTGAATTGCCTCTATTTGACCCAAACCATCCTACCCATTCAGACAGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAATAGAGGCAATTCACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAATAGAGGCAATTCACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.177 | 0.169 | search_plus_done; http://172.18.8.135:50400/match?q=CAAATAGAGGCAATTCACCA&k=0&no_gap=0&offset=0&limit=50
0.413 | 0.236 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTGAATTGCCTCTATTTG&k=0&no_gap=0&offset=0&limit=49
0.417 | 0.003 | cgi_end;

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