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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:26:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

EST1234506 ESTSYN-L Musa acuminata AAA Group cDNA clone pESTSYNL-2P20 5', mRNA sequence.
ES434300.1:105-124
GCTGACAGAGCCCATCGTGCTCCTCTTCTA105CAAGACCGTCTCCATCTGGTTCCTCCTCCTCCAGAAGATATCCCTCCGTT
EST1234856 ESTSYN-L Musa acuminata AAA Group cDNA clone pESTSYNL-3N10 5', mRNA sequence.
ES434650.1:113-132
GCTGACAGAGCCCATCGTGCTCCTCTTCTA113CAAGACCGTCTCCATCTGGTTCCTCCTCCTCCAGAAGATATCCCTCCAGT
TSA: Musa acuminata AAA Group Unigene69547_B1 mRNA sequence.
JV318425.1:43-62
GCTGACAGAGCCCATCGTGCTCCTCTTCTA43CAAGACCGTCTCCATCTGGTTCCTCCTCCTCCAGAAGATATCCCTCCAGT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A07.
HG996473.1:34253530-34253549
GCTGACAGAGCCCATCGTGCTCCTCTTCTA34253530CAAGACCGTCTCCATCTGGTTCCTCCTCCTCCAGAAGATATCCCTCCAGC
Musa schizocarpa genome assembly, chromosome: S07.
LS990920.1:37838247-37838266
GCTGACAGAGCCCATCGTGCTCCTCTTCTA37838247CAAGACCGTCTCCATCTGGTTCCTCCTCCTCCAGAAGATATCCCTCCGGT
Cottoperca gobio genome assembly, chromosome: 15.
LR131922.1:23796667-23796686
TGGCTCTGACTGAGCAGGAGGAGACGCAGG23796667ACCAGATGGAGACGGTCTTGGAGGAGAAACTGAACCTCATCCAGGAGATG
Musa troglodytarum cultivar karat chromosome 7.
CP097509.1:8693172-8693191
ACTGGAGGGATATCTTCTGGAGGAGGAGGA8693172ACCAGATGGAGACGGTCTTGTAGAAGAGGAGCACGATGGGCTCTGTCAGC
Canna indica chromosome 2.
CP136891.1:12687368-12687387
AGCGCCAGGAGACCTTTTGGAGGAGGATGA12687368ACCAGATGGAGACGGTCTTGTAGAAGATGAGCACGATGGAATCCGCCAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAGACCGTCTCCATCTGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGACCGTCTCCATCTGGT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.313 | 0.305 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGACCGTCTCCATCTGGT&k=0&no_gap=0&offset=0&limit=50
0.422 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=ACCAGATGGAGACGGTCTTG&k=0&no_gap=0&offset=0&limit=45
0.424 | 0.002 | cgi_end;

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