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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:51:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:19145507-19145526
TATCCAGAGGATTTCAAAGGCCAAGCAAGG19145507CAATGAGGCTACGGCCCAACTACATATCAGTGAGTGGGCTTTGTTTTTCA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:18503205-18503224
TATCCAGAGGATTTCAAAGGCCAAGCAAGG18503205CAATGAGGCTACGGCCCAACTACATATCAGTGAGTGGGCTTTGTTTTTCA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:19261655-19261674
TATCCAGAGGATTTCAAAGGCCAAGCAAGG19261655CAATGAGGCTACGGCCCAACTACATATCAGTGAGTGGGCTTTGTTTTTCA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:35869073-35869092
CATCCAGAGGATTTCAAAGGCCAAGCAAGA35869073CAATGAGGCTACGGCCCAACTATATATCAGTGAGTGGGCTTTGTTTTTCA
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:34944844-34944863
TATCCAGAGGATTTCAAAGGCCAAGCAAGG34944844CAATGAGGCTACGGCCCAACTATATATCAGTGAGTGGGCTTTGTTTTTCA
Malus domestica genome assembly, chromosome: 15.
OU696691.1:36124415-36124434
CATCCAGAGGATTTCAAAGGCCAAGCAAGA36124415CAATGAGGCTACGGCCCAACTATATATCAGTGAGTGGGCTTTGTTTTTCA
Malus domestica genome assembly, chromosome: 15.
OU744556.1:35875979-35875998
CATCCAGAGGATTTCAAAGGCCAAGCAAGA35875979CAATGAGGCTACGGCCCAACTATATATCAGTGAGTGGGCTTTGTTTTTCA
Malus domestica genome assembly, chromosome: 15.
OU744967.1:36002834-36002853
CATCCAGAGGATTTCAAAGGCCAAGCAAGA36002834CAATGAGGCTACGGCCCAACTATATATCAGTGAGTGGGCTTTGTTTTTCA
Malus domestica genome assembly, chromosome: 15.
OU745005.1:35651015-35651034
TATCCAGAGGATTTCAAAGGTCAAGCAAGG35651015CAATGAGGCTACGGCCCAACTATATATCAGTGGGTGGGCTTTGTTTTTCA
Hymenobacter sp. DG25B, complete genome.
CP010054.1:28291-28310
AAAAGACCACACCGGGCGCTATGTGCTGGC28291CAATGAGGCTACGGCCCAACTGCACAGCATGAGCTTGCCCGAGCTGTTAG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:20538595-20538614
TGAAAAACAAAGCCCACTCACTGATATATA20538595GTTGGGCCGTAGCCTCATTGTCTTGCTTGGCCTTTGAAATCCTCTGGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAATGAGGCTACGGCCCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATGAGGCTACGGCCCAAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.319 | 0.311 | search_plus_done; http://172.18.8.135:50400/match?q=CAATGAGGCTACGGCCCAAC&k=0&no_gap=0&offset=0&limit=50
0.408 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGGGCCGTAGCCTCATTG&k=0&no_gap=0&offset=0&limit=40
0.409 | 0.001 | cgi_end;

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