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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 11:44:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB024J16, complete sequence.
AC189275.2:23386-23405
CCAAGCCTCGTTCTCACAAGAGTACCAATC23386ATCAGAAGCCATACCTTGTGTAAACACGGCGCATATAGGTTACAGCAGTT
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:35091993-35092012
CAAGCCTTGTTCTCACAAGAGTACCAAATC35091993ATCAGAAGCCATACCTTGTGTAAACACGGCGCATATAGGTTACAGCAGTT
Brassica napus genome assembly, chromosome: A02.
HG994356.1:29561149-29561168
CAAGCCTTGTTCTCACAAGAGTACCAAATC29561149ATCAGAAGCCATACCTTGTGTAAACACGGCGCATATAGGTTACAGCAGTT
Brassica rapa genome, scaffold: A02.
LR031573.1:27825335-27825354
CCAAGCCTTGTTCTCACAAGATTACCAATC27825335ATCAGAAGCCATACCTTGTGTAAACACGGCGCATATAGGTTACAGCAGTT
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:28756549-28756568
CCAAGCCTTGTTCTCACAAGATTACCAATC28756549ATCAGAAGCCATACCTTGTGTAAACACGGCGCATATAGGTTACAGCAGTT
Cepaea hortensis genome assembly, chromosome: 15.
OY992890.1:1515334-1515353
GGCCCTGTCTTGAAGCAATAGGTCCAGCAG1515334ATCAGAAGCCATACCTTGTGAGGCTGGCTGTTCTCTCGTCTGTGTAGTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACAAGGTATGGCTTCTGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACAAGGTATGGCTTCTGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.367 | 0.359 | search_plus_done; http://172.18.8.135:50400/match?q=CACAAGGTATGGCTTCTGAT&k=0&no_gap=0&offset=0&limit=50
0.467 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAGAAGCCATACCTTGTG&k=0&no_gap=0&offset=0&limit=50
0.471 | 0.004 | cgi_end;

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