GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 09:02:49, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum virginianum mRNA, clone: SEP08I24, 5'end, expressed in sepal at 10d after anthesis.
FS062901.1:399-418
TGATAATGGGACGGAAAAAGGGAATCTTGA399CACATTGGTGAAAGCCATTGCTGGGGTTTCTGTCGGTAGTCAAACTGACC
Laburnum anagyroides genome assembly, chromosome: 2.
OZ176096.1:45152414-45152433
AAATCAGTACGTTGCATCATGCGGCAAGCC45152414CACATTGGTGAAAGCCATTGTTTGCAACCAAATCCTGAATACAAAGGCCG
Fulvitalea axinellae DSM 100852 DNA, complete genome.
AP025314.1:1352649-1352668
GCTTAACACCATTATCTACGACCACGACAT1352649CACATTGGTGAAAGCCATTGTGGATAAGGCCAAAACGGCTGGAATTACGG
Gelis areator genome assembly, chromosome: 3.
OZ060546.1:24070378-24070397
AGTTTCTTCTATCCAATCTACGTAGTAATA24070378CACATTGGTGAAAGCCATTGGCACTCCAATTTCGCCCAGGCCCGACTCTA
Lissotriton helveticus genome assembly, chromosome: 4_1.
OZ180048.1:1641974355-1641974374
AAGCAATTTTTGCAAAGCAAGAAGGTAAAA1641974355CACATTGGTGAAAGCCATTGCATGCAGGCACAGTGGGTAATGTTTCCTGG
Lissotriton vulgaris genome assembly, chromosome: 9.
OZ183361.1:920728704-920728723
GTTACATGTTTCTGTTTTTTTTAAAGGCAT920728704CACATTGGTGAAAGCCATTGACATCACTTCCTGTCTCTCACACAAGGGCA
Lissotriton vulgaris genome assembly, chromosome: 9.
OZ183361.1:920733363-920733382
GTTACATGTTTCTGTTTTTTTTAAAGGCAT920733363CACATTGGTGAAAGCCATTGACATCACTTCCTGTCTCTCACACAAAGGCA
Solanum virginianum mRNA, clone: LS001B17, 3'end, expressed in ovary at anthesis.
FS017757.1:97-116
GGTCAGTTTGACTACCGACAGAAACCCCAG97CAATGGCTTTCACCAATGTGTCAAGATTCCCTTTTTCCGTCCCATTATCA
Narthecium ossifragum genome assembly, chromosome: 9.
OY986971.1:2267384-2267403
CGGCCTTTGTATTCAGGTTTTGGTTGTAAG2267384CAATGGCTTTCACCAATGTGGGCATGTAGATGGATGAAACGTACAGATTT
Leptopterna dolabrata genome assembly, chromosome: 9.
OX940983.1:17766403-17766422
TGTTTCACACCACTGACCTACCAGAGCCAC17766403CAATGGCTTTCACCAATGTGGAAAGCTTGCACTTCCTAACATTCTACGAT
Ctena imbricatula genome assembly, chromosome: 3.
OZ217478.1:55885738-55885757
TGCAAAAGTATTTTCAAAGATGGACATGAA55885738CAATGGCTTTCACCAATGTGAGCTAAGTCCTGAATCAAGGAACATTACGG
Ctena imbricatula genome assembly, chromosome: 11.
OZ217486.1:92420790-92420809
TGCAAAAGTATTTTCAAAGATGGACATGAA92420790CAATGGCTTTCACCAATGTGAGCTAAGTCCTGAATCAAGGAACATTACGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACATTGGTGAAAGCCATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACATTGGTGAAAGCCATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.367 | 0.358 | search_plus_done; http://172.18.8.135:50900/match?q=CACATTGGTGAAAGCCATTG&k=0&no_gap=0&offset=0&limit=50
0.624 | 0.258 | search_minus_done; http://172.18.8.135:50900/match?q=CAATGGCTTTCACCAATGTG&k=0&no_gap=0&offset=0&limit=43
0.628 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).