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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:26:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Spergularia bocconei genome assembly, chromosome: 11.
OY734952.1:2119982-2120001
AGCGATCAAAGAGGTTCATCGTAGAACCCC2119982CACGGAAGCCATTACACCTCAACCTAGCAGTATGCGCTAATCGGACTCCA
Chorisops tibialis genome assembly, chromosome: 3.
OY770264.1:180911010-180911029
GATATGGTGTTCTGGCAGACACAGTCGCAG180911010CACGGAAGCCATTACACCTCGTGGCCTAGTAATTTCGTAATTGAATTCTA
Dianthus caryophyllus mRNA, clone: CES09E16, 5' end sequence.
FY385614.1:292-311
TGGACTCCGACTCGCGAATACCGATAGATT292GAGGTGTAATGGCTTCCGTGGCGGTGCTACTATGAATCTCTTTGATCGAT
Dianthus caryophyllus mRNA, clone: CES14P19, 5' end sequence.
FY387767.1:263-282
TGGACTCCGACTCGCGAATACCGATAGATT263GAGGTGTAATGGCTTCCGTGGCGGTGCTACTATGAATCTCTTTGATCGAT
Dianthus caryophyllus mRNA, clone: CES17I07, 5' end sequence.
FY388724.1:306-325
TGGACTCCGACTCGCGAATACCGATAGATT306GAGGTGTAATGGCTTCCGTGGCGGTGCTACTATGAATCTCTTTGATCGAT
Dianthus caryophyllus mRNA, clone: CFES16_K10, 5' end sequence.
FY400088.1:217-236
TGGACTCCGACTCGCGAATACCGATAGATT217GAGGTGTAATGGCTTCCGTGGCGGTGCTACTATGAATCTCTTTGATCGAT
TSA: Dianthus caryophyllus mRNA, contig: CAK09.758.C1.
FX298099.1:347-366
TGGACTCCGACTCGCGAATACCGATAGATT347GAGGTGTAATGGCTTCCGTGGCGGTGCTACTATGAATCTCTTTGATCGAT
TSA: Silene latifolia Sl_contig4378 mRNA sequence.
JO780397.1:362-381
TGGAGTCCGATTAGCGCATAATGATAGGTT362GAGGTGTAATGGCTTCCGTGGTGGTGCCACCATGAATCTCTTTGATCGAT
Spergularia bocconei genome assembly, chromosome: 8.
OY734949.1:24250839-24250858
TGGAGTCAGATTAGCGCACACTGATAGGTT24250839GAGGTGTAATGGCTTCCGTGGGGGTTCTACGATGAACCTCTTTGATCGAT
Spergularia marina genome assembly, chromosome: 6.
OY804549.1:27245049-27245068
TGGAGTCAGATTAGTGCATACTGATAGGTT27245049GAGGTGTAATGGCTTCCGTGGGGGTTCTACGATGAACCTCTTTGATCGCT
Spergularia marina genome assembly, chromosome: 13.
OY804556.1:22321342-22321361
TGGAGTCCGATTAGCGCATACTGCTAGGTT22321342GAGGTGTAATGGCTTCCGTGGGGGTTCTACGATGAACCTCTTTGATCGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACGGAAGCCATTACACCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACGGAAGCCATTACACCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.164 | 0.155 | search_plus_done; http://172.18.8.135:50400/match?q=CACGGAAGCCATTACACCTC&k=0&no_gap=0&offset=0&limit=50
0.660 | 0.496 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGTGTAATGGCTTCCGTG&k=0&no_gap=0&offset=0&limit=48
0.666 | 0.006 | cgi_end;

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