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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 01:42:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Arachis hypogaea CL4850Contig1.Arhy mRNA sequence.
EZ748922.1:58-77
TTTTATGAAGGGATTATTAATCTATAATTT58CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
TSA: Arachis hypogaea Ahy.Unigene9866 mRNA sequence.
JR550254.1:41-60
TAATTTTATGAAGGGATTAATCTATAACTT41CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:110944971-110944990
TAATTTTATGAAGGGATTAATCTATAACTT110944971CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:150599675-150599694
TTTTATGAAGGGATTATTAATCTATAATTT150599675CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:158167039-158167058
TTTTATGAAGGGATTATTAATCTATAATTT158167039CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
TFL_105_G10_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-105_G10 5', mRNA sequence.
ES768451.1:237-256
GGAAAAAGTATCTAAGGGGACAGGATTATA237AGTTAGGCCTTGCATATCTGAAATTATAGATTAATAATCCCTTCATAAAA
TSA: Arachis duranensis DurSNP_c11377.Ardu mRNA sequence.
HP011365.1:686-705
GGAAAAAGTATCTAAGGGGACAGGATTATA686AGTTAGGCCTTGCATATCTGAAGTTATAGATTAATCCCTTCATAAAATTA
TSA: Arachis duranensis Aduranensis_small_c11114_2 mRNA sequence.
JR335407.1:228-247
GGAAAAAGTATCTAAGGGGACAGGATTATA228AGTTAGGCCTTGCATATCTGAAGTTATAGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGATATGCAAGGCCTAACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGATATGCAAGGCCTAACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.397 | 0.388 | search_plus_done; http://172.18.8.135:50400/match?q=CAGATATGCAAGGCCTAACT&k=0&no_gap=0&offset=0&limit=50
0.579 | 0.182 | search_minus_done; http://172.18.8.135:50400/match?q=AGTTAGGCCTTGCATATCTG&k=0&no_gap=0&offset=0&limit=45
0.581 | 0.002 | cgi_end;

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