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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 04:08:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Danio kyathit genome assembly, chromosome: 25.
LR812543.1:26481888-26481907
GAGCTTTTTCAAATTATATCTTGGCATTTG26481888CAGCTTTTGCAGGTCCATTTGTTGTGTTCCCTTTTTCCTCAATTTAGTTT
Trifolium pratense cDNA clone:RCE32232.
BB923988.1:176-195
TTTCTACATACAAATTAATCACTGTACTTT176CAGCTTTTGCAGGTCCATTTTTGTTTTTTTCCTCTGTTCTTCACAGGGTT
Trifolium pratense RNA for hypothetical protein, complete cds, clone: C27.
AB236839.1:200-219
TTTCTACATACAAATTAATCACTGTACTTT200CAGCTTTTGCAGGTCCATTTTTGTTTTTTTCCTCTGTTCTTCACAGGGTT
Magelona johnstoni genome assembly, chromosome: 13.
OZ012696.1:3431440-3431459
ATGGATTCACCATTTTGATTTTGCTATCAT3431440CAGCTTTTGCAGGTCCATTTACCTCAGTCAACTGCTGGAAACTAAGAGTA
Magelona johnstoni genome assembly, chromosome: 13.
OZ012696.1:3440340-3440359
ATGGATTCACCATTTTGATTTTGCTATCAT3440340CAGCTTTTGCAGGTCCATTTACCTCAGTCAACTGCTGGAAACTAAGAGTA
Danio aesculapii genome assembly, chromosome: 25.
LR812502.1:15069955-15069974
AAACTAAATTGAGGAAAAAGGGAACACAAC15069955AAATGGACCTGCAAAAGCTGCAAATGCCAAGATATAATTTGAAAAAGCTC
Magelona johnstoni genome assembly, chromosome: 8.
OZ012691.1:3250232-3250251
TACTCTCAATTTCCAGCTTTTGACTGAGGT3250232AAATGGACCTGCAAAAGCTGATGATAGCAAAATCATGTGCCCTTTTAACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGCTTTTGCAGGTCCATTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCTTTTGCAGGTCCATTT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.345 | 0.336 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCTTTTGCAGGTCCATTT&k=0&no_gap=0&offset=0&limit=50
0.452 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=AAATGGACCTGCAAAAGCTG&k=0&no_gap=0&offset=0&limit=45
0.453 | 0.001 | cgi_end;

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