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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-04 18:47:59, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Dianthus caryophyllus mRNA, clone: CES15C20, 5' end sequence.
FY387839.1:734-753
ACATGGCCGCGCATCTTCTTGAAATGTGAG734CAGGAACGTCGACTACGACAACAACAGATTGTTGTTGTTGTTGCTTTGGA
Hierochloe odorata genome assembly, chromosome: 1.
OZ243078.1:217309930-217309949
GTAGCCCTTCTCGCCGGAGTGAATGGAGCT217309930CAGGAACGTCGACTACGACAAGCTCCTAAAGCGCTCGTCACTGGAGAAGA
Eunicella verrucosa genome assembly, chromosome: 2.
OZ197014.1:38270694-38270713
GAACGAGATGGTGTCGGCGCTCAACGACGA38270694CAGGAACGTCGACTACGACAGACTAAAAAAAGGAGACGACTTGGAATTGC
Dianthus caryophyllus mRNA, clone: CES08B19, 5' end sequence.
FY385166.1:167-186
AATACTTCCAAAGCAACAACAATCTGTTGT167TGTCGTAGTCGACGTTCCTGCTCACATTTCAAGAAGATGCGCGGCCATGT
Dianthus caryophyllus mRNA, clone: CES23E05, 5' end sequence.
FY390882.1:173-192
TCCAAAGCAACAACAACAACAATCTGTTGT173TGTCGTAGTCGACGTTCCTGCTCACATTTCAAGAAGATGCGCGGCCATGT
TSA: Dianthus caryophyllus mRNA, contig: CAK09.715.C1.
FX298016.1:166-185
AATACTTCCAAAGCAACAACAATCTGTTGT166TGTCGTAGTCGACGTTCCTGCTCACATTTCAAGAAGATGCGCGGCCATGT
TSA: Dianthus caryophyllus mRNA, contig: CAK09.715.C2.
FX298017.1:173-192
TCCAAAGCAACAACAACAACAATCTGTTGT173TGTCGTAGTCGACGTTCCTGCTCACATTTCAAGAAGATGCGCGGCCATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGGAACGTCGACTACGACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGAACGTCGACTACGACA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.514 | 0.505 | search_plus_done; http://172.18.8.135:50900/match?q=CAGGAACGTCGACTACGACA&k=0&no_gap=0&offset=0&limit=50
1.071 | 0.556 | search_minus_done; http://172.18.8.135:50900/match?q=TGTCGTAGTCGACGTTCCTG&k=0&no_gap=0&offset=0&limit=47
1.074 | 0.003 | cgi_end;

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