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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 17:47:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Scyliorhinus canicula genome assembly, chromosome: 7.
LR744036.1:141176913-141176932
AGAGTAGCTAAAGGTCCTTTGCAGCAGAGA141176913CAGGGGATTTTATCATGGGGAATGAGGAAATGGTGGAGGCATTGAACAAA
Lotus japonicus genomic DNA, chromosome 5, clone: LjT31L14, TM0366.
AP006667.1:89404-89423
AATCATAAATTATGATAAAATGCATAAAGG89404CAGGGGATTTTATCATGGGGGACAAAAATCTGATTTTGTAGGAAGATTGT
Lotus japonicus genomic DNA, chromosome 5, clone: LjB21O22, BM1451.
AP008090.2:91544-91563
ACAATCTTCCTACAAAATCAGATTTTTGTC91544CCCCATGATAAAATCCCCTGCCTTTATGCATTTTATCATAATTTATGATT
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:64640705-64640724
ACAATCTTCCTACAAAATCAGATTTTTGTC64640705CCCCATGATAAAATCCCCTGCCTTTATGCATTTTATCATAATTTATGATT
Brachyptera putata genome assembly, chromosome: 14.
OU015475.1:9911662-9911681
AGACATACACCAGCACCAATTACGAATAAC9911662CCCCATGATAAAATCCCCTGCATAAAAGCACATCATTGTTCTTGATTGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGGGGATTTTATCATGGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGGGATTTTATCATGGGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.372 | 0.363 | search_plus_done; http://172.18.8.135:50400/match?q=CAGGGGATTTTATCATGGGG&k=0&no_gap=0&offset=0&limit=50
0.482 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=CCCCATGATAAAATCCCCTG&k=0&no_gap=0&offset=0&limit=48
0.484 | 0.002 | cgi_end;

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