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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:36:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Elaeis guineensis EST, clone (6lib)_isotig20667.
LM627660.1:801-822
TACCCGGACCTTCACCCCCTCCGGGATGTC801CATCATCTCCGTTGCCAGTATTGTCTTCATCTTCTCCGTCTCCGCCGCCGCC
OPYF00687 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 180-F5-T3.seq, mRNA sequence.
EL681599.1:8-29
TGAAGAC8AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
OPYF01567 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone PLATE-205-H6-T3.seq, mRNA sequence.
EL682454.1:10-31
ATTGAAGAC10AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
pOP-EO02861 EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02861 similar to Structural constituent of ribosome, mRNA sequence.
ES324084.1:133-154
GGCGGCGGCGGAGACGGAGAAGATGAAGAC133AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
pOP-EO02861_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02861 5', mRNA sequence.
EY410518.1:132-153
GGCGGCGGCGGAGACGGAGAAGATGAAGAC132AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
Leptura quadrifasciata genome assembly, chromosome: 3.
OY776675.1:113187661-113187682
GTGGACATTGAACAAAAAGATGGAGAATAA113187661AATACTGGCAACGGAGATGATGTATTGGAGACGATGTTGTAAAAAGACATTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATCATCTCCGTTGCCAGTATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCATCTCCGTTGCCAGTATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.272 | 0.263 | search_plus_done; http://172.18.8.135:50400/match?q=CATCATCTCCGTTGCCAGTATT&k=0&no_gap=0&offset=0&limit=50
0.623 | 0.351 | search_minus_done; http://172.18.8.135:50400/match?q=AATACTGGCAACGGAGATGATG&k=0&no_gap=0&offset=0&limit=49
0.627 | 0.003 | cgi_end;

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