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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-04 08:04:39, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pipistrellus pygmaeus genome assembly, chromosome: 14.
OX465316.2:4478656-4478675
TCCTCCCCCCCGCAGCCATGGCCGAGCTCA4478656CATCCGGGTCTCTGACCCTCTGAAAGGCTCCTGCCGCCCTGTGGGTGCAA
Vespertilio murinus genome assembly, chromosome: 11.
OZ004715.2:4475288-4475307
GGGCCCCACCCGCAGCCGTGGCTGAGCTCA4475288CATCCGGGTCTCTGACCCTCCGAAAGGCTCCCGCCGCCCTGCGGGTGTAA
Lotus japonicus genomic DNA, chromosome 5, clone: LjB21O22, BM1451.
AP008090.2:91378-91397
ATTTCTGACTCATGAAGTCATGATCCCTTG91378CATCCGGGTCTCTGACCCTCCAAATTATAAAATATATATATATATATATA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:64640563-64640582
ATTTCTGACTCATGAAGTCATGATCCCTTG64640563CATCCGGGTCTCTGACCCTCCAAATTATAAAATATATATATATATATATA
Chionographis japonica genome assembly, chromosome: 1.
OX393549.1:61891454-61891473
TCGGGTTGGAGATTACTTCTTTGAGCTCAC61891454CATCCGGGTCTCTGACCCTCTTCTCCGGGCTCCTCCTCTGCTTCGGTTCA
Arvicola amphibius genome assembly, chromosome: 8.
LR862388.1:108143605-108143624
ACCAAGTGTAACGTTTTATTGCCTTTTCCT108143605GAGGGTCAGAGACCCGGATGAGAATCCAACTCTTTACTGTCATAGGGGAA
Chionomys nivalis genome assembly, chromosome: 2.
OX465450.1:112963874-112963893
TATTGATCTTGAACCTTGATGCCTTTGCCT112963874GAGGGTCAGAGACCCGGATGAGAATCCAACTCTTTACTGTCACAAGGGAA
Pipistrellus pipistrellus genome assembly, chromosome: 14.
LR862370.1:49465777-49465796
TTGCACCCACAGGGCGGCAGGAGCCTTTCA49465777GAGGGTCAGAGACCCGGATGTGAGCTCGGCCATGGTTGCGGGGGTGAGGG
Pipistrellus hanaki genome assembly, chromosome: 13.
OZ203245.1:55902821-55902840
TTGCACCCACAGGGCGGCAGGAGCCTTTCA55902821GAGGGTCAGAGACCCGGATGTGAGCTTGGCCATGGTTGCGGGGGTGAGGG
Pipistrellus nathusii genome assembly, chromosome: 14.
OZ209757.2:49721493-49721512
TTGCACCCACAGGGCGGCAGGAGCCTTTCA49721493GAGGGTCAGAGACCCGGATGTGAGCTCGGCCATGGCTGCGGGGGGTGGAG
Pipistrellus pipistrellus genome assembly, chromosome: 14.
OZ242154.2:50565819-50565838
TTGCACCCACAGGGCGGCAGGAGCCTTTCA50565819GAGGGTCAGAGACCCGGATGTGAGCTCGGCCATGGTTGCGGGGGTGAGGG
Lotus japonicus genomic DNA, chromosome 5, clone: LjT31L14, TM0366.
AP006667.1:89570-89589
TATATATATATATATATATTTTATAATTTG89570GAGGGTCAGAGACCCGGATGCAAGGGATCATGACTTCATGAGTCAGAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATCCGGGTCTCTGACCCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCCGGGTCTCTGACCCTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.285 | 0.276 | search_plus_done; http://172.18.8.135:50900/match?q=CATCCGGGTCTCTGACCCTC&k=0&no_gap=0&offset=0&limit=50
0.549 | 0.265 | search_minus_done; http://172.18.8.135:50900/match?q=GAGGGTCAGAGACCCGGATG&k=0&no_gap=0&offset=0&limit=45
0.554 | 0.005 | cgi_end;

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