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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:41:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-1016 Pericarp Coffea canephora cDNA clone cccp15e19 5', mRNA sequence.
DV663336.1:39-63
TGCATTAGAGAGATATATAGAGGTCAGATC39CATCGTATCTCGCCCTCTCTCTTTCATCTCTCCTCTTCTTTTGATCAGCAGCAGA
CGN-48450 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w6m22 5', mRNA sequence.
DV702129.1:17-41
ATATAGAGATCAGATC17CATCGTATCTCGCCCTCTCTCTTTCATCTCTCCTCTTCTTTTGATCAGCAGCAGA
CC-L01_018_A01 Coffea young leaves Coffea canephora cDNA clone CC-L01_018_A01, mRNA sequence.
EE193037.1:28-52
ATTNGAGAGATATATAGAGATCAGATC28CATCGTATCTCGCCCTCTCTCTTTCATCTCTCCTCTTCTTTTGATCANNAGCAGA
CC-F01_006_B10 Cherry of different development stage Coffea canephora cDNA clone CC-F01_006_B10, mRNA sequence.
EE196765.1:38-62
TGCATTAGAGAGATATATAGAGATCAGATC38CATCGTATCTCGCCCTCTCTCTTTCATCTCTCCTCTTCTTTTGATCAGCAGCAGA
TransId-281222 CarCatBudEnri2 Coffea arabica cDNA clone CarCatBudEnri2_81-F12-PAL17d similar to Protein phosphatase 2C - Nicotiana tabacum (Common tobacco), mRNA sequence.
GT020855.1:58-82
TGCATTAGAGAGATATATAGAGGTCAGATC58CATCGTATCTCGCCCTCTCTCTTTCATCTCTCCTCTTCTTTTGATCAGCAGCAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATCGTATCTCGCCCTCTCTCTTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCGTATCTCGCCCTCTCTCTTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.432 | 0.423 | search_plus_done; http://172.18.8.135:50400/match?q=CATCGTATCTCGCCCTCTCTCTTTC&k=0&no_gap=0&offset=0&limit=50
0.529 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAGAGAGAGGGCGAGATACGATG&k=0&no_gap=0&offset=0&limit=45
0.529 | 0.000 | cgi_end;

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