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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:36:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense DNA, clone:RCG01686.
DE213457.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG02242.
DE213903.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATGGGTAACCAAC
Trifolium pratense DNA, clone:RCG02425.
DE214050.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAGTGGTTAACCAAC
Trifolium pratense DNA, clone:RCG02835.
DE214371.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG02916.
DE214434.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG03210.
DE214671.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG03245.
DE214702.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG03255.
DE214712.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG03491.
DE214906.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG03518.
DE214921.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG03611.
DE214997.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG03790.
DE215158.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG04236.
DE215529.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG04329.
DE215605.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG04533.
DE215763.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG04541.
DE215771.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG01048.
DE246697.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG01053.
DE246702.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium pratense DNA, clone:RCG01079.
DE246722.1:1-20
1CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:51001187-51001206
ATACTATAAACACTTAATTAAATTGTTAAT51001187CCAAACAGGACCCAAGACAAAAACACCAACAACAATAATTAACCAACCAG
Trifolium repens isolate ACLI19 chromosome 06_Pall.
CP125847.1:51234670-51234689
ATCCTATAAACGCTTAATTAAATTGTTAAT51234670CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAAC
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:74044132-74044151
ATAATATAGACACTTAATTAAATTGTTTAT74044132CCAAACAGGACCCAAGACAAAAACACCAAAAGTAACAATAATTAACCAAC
Hordeum bulbosum genome assembly, chromosome: 7H_2.
OY737502.1:391397876-391397895
CTCAAACTAGCTCCAGCCCATGGAATGAAC391397876CCAAACAGGACCCAAGACAAGGATATAGTACAACTACCGTTAGTGTAACG
Alisma plantago-aquatica genome assembly, chromosome: 2.
OY856410.1:271991805-271991824
TTTAACTCTGATTTTTAATCATGCACCCTA271991805CCAAACAGGACCCAAGACAAGAATCTTTGGAGATGTGAGCATACCAACCA
Sylvilagus floridanus genome assembly, chromosome: 2.
OX463224.1:13891164-13891183
TTTCCTGCACACCTGAGCACGTAGGAAGCT13891164TTGTCTTGGGTCCTGTTTGGAACTCTGACTGCTCCTTTGCTCTCGCTTCT
Thalassophryne amazonica genome assembly, chromosome: 15.
LR722980.1:22101900-22101919
ACATATTGTCTCATCCACCACATTTCGGTA22101900TTGTCTTGGGTCCTGTTTGGTAACCACCCAGGCGCATCACCTGTCCGTCC
Trifolium pratense DNA, clone:RCG01780.
DE213531.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG01806.
DE213552.1:326-345
GTTGGTTAATTATTGTTGTTGTTGGTGTTT326TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG01975.
DE213694.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG02035.
DE213743.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG02168.
DE213848.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG02254.
DE213913.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG02709.
DE214268.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG03382.
DE214817.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG03679.
DE215061.1:338-357
GTTGGTTAATTATTGTTGTTGTTGGTGTTT338TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG03711.
DE215087.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG03992.
DE215324.1:268-287
GTTGGTTAATTATTGTTGTTGTTGGTGTTT268TTGTCTTGGGTCCTGTTTGG
Trifolium pratense DNA, clone:RCG04133.
DE215438.1:368-387
GTTGGTTAATTATTGTTGTTGTTGGTGTTT368TTGTCTTGGGTCCTGTTTGG
Lotus japonicus genomic DNA, clone: LjT03L06, TM1622.
AP010232.1:16071-16090
GTTGGTTAATTATTGTTGTTGTTGGTGTTT16071TTGTCTTGGGTCCTGTTTGGTTAAAATCCATAGTAGAAAAAGACTTGCGA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT43J12, TM1621.
AP010627.1:31393-31412
GTTGGTTAATTATTGTTGTTGTTGGTGTTT31393TTGTCTTGGGTCCTGTTTGGCGTTGGAGTTGCTCTTAGGAGCTTAGTAAC
Chrysanthemum makinoi genome assembly, chromosome: 7.
OU343223.1:107844003-107844022
ATATTTCACTCTCATTATCGTCCCCTTATC107844003TTGTCTTGGGTCCTGTTTGGTTTTGGTTTTCTTAATTTTACCTTCAACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAAACAGGACCCAAGACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAACAGGACCCAAGACAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.408 | 0.399 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAACAGGACCCAAGACAA&k=0&no_gap=0&offset=0&limit=50
0.673 | 0.266 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTCTTGGGTCCTGTTTGG&k=0&no_gap=0&offset=0&limit=26
0.685 | 0.012 | cgi_end;

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